I'm currently trying to run the CCDLoopClosureMover function in order to attach two protein domains together.
When I try to add a single cutpoint variant around my jump point, I repeatedly get a warning that says:
"Residue 126 is not compatible with cutpoints; variant type not changed."
Residue 126 is the Cterminus
This warning also shows up for residue 127 (the Nterminus of the other protein domain). And thus, I cannot apply CCD to my pose because I don't have a cutpoint variant....