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Error in src/protocols/membrane/util.cc line: 1224

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Error in src/protocols/membrane/util.cc line: 1224
#1

Hi, I am trying to prepare a MPDocking run (v 2019.35).

Both prepacking as well as actual docking crash with the same message:

ERROR: The SpanningTopology object in MembraneInfo is empty!
ERROR:: Exit from: src/protocols/membrane/util.cc line: 1224

However, the attached log file seems to indicate that the molecule was read correctly. Also the TMspans were build and their center calculated (end of logfile).

 

 

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prepack.log32.91 KB
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Tue, 2020-02-11 08:10
renedominik

To answer my own question, one docking partner was actually soluble (had no TM spans).
That means the actual question is, whether it is possible to dock a soluble to a TM protein? 
This question is discussed here:

https://www.rosettacommons.org/node/10446

Wed, 2020-02-12 06:16
renedominik