we are trying to run protien -ligand docking. We were able todo succesfully the tutorial and do for some of our drug molecules except "Diltiazem". we generated conformers using online tool [mentioned in the tutorial] and tried schrodinger conformers too. but the following error still persists. Screen shot is attached.
'Translate' mover" chain X doesnot exist.
We checked the conformers pdb file every conformer is seperated by 'TER' text and both PDB and conformers file has chain X.
we are in the process of manuscript revision with tight timeline and we are struck with this issue.