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Go parallel

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Go parallel

Hi, I am wondering is that possible to run the pyRosetta scripts on GPU.
Or how much benefit would be there to do so?

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Tue, 2011-11-29 10:47

Generally speaking, it's not possible. We're playing around with Rosetta integration onto GPU; nobody has looked at pyrosetta integration.

There would likely be speed benefits, but it's an open question if they'd outweigh the developer time cost in getting it working.

Tue, 2011-11-29 11:24

I see. Thanks for the reply. Sounds like the regular Rosetta package is under development for GPU, correct? Is there a schedule for releasing of the Rosetta GPU package?

Tue, 2011-11-29 12:00

There is no official schedule for releasing GPU code, nor is all of Rosetta being ported, only a few pieces so far.

Tue, 2011-11-29 13:12

It seems there is a cuda version of python, would that be possible just transfer the python modules to the pycuda? I guess technically should be no problem, but it will be a lot of work anyhow. Thanks again.

Tue, 2011-11-29 12:04