I have finally run Rosetta Holes successfully, however since there is no documentation of any kind for Holes, I don't know how to interpret the output:
RosettaHoles: HEADER File/Tag RosHol resl dec25 dec15 AAresl AAdec25 AAdec15 RosScore
RosettaHoles: RMS 1UBQ.pdb 1.7825 1.7813 -1.9173 -0.6209 1072.32 -1154.23 -373.78 -16.036 0.0000
Can anyone tell me the meaning of the abbreviations in the header? (at least the non-obvious ones)
Why is there a 0.000 at the end of the score list?