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Author: Jared Adolf-Bryfogle (jadolfbr@gmail.com)

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Author: Jared Adolf-Bryfogle (jadolfbr@gmail.com) A residue selector that selects based on set residue properties. Default is to use OR logic for multiple properties. This can be set via selection_logic option.

<ResiduePropertySelector name="(&string;)" properties="(&string_cslist;)"
        logic="(and_logic &logic_types;)" />
  • properties: A comma-separated list of properties for selection. Current choices are: POLYMER, LIGAND, PROTEIN, CANONICAL_AA, CANONICAL_NUCLEIC, DNA, RNA, TNA, PNA, PEPTOID, OLIGOUREA, ARAMID, ORTHO_ARAMID, META_ARAMID, PARA_ARAMID, PRE_METHYLENE_ORTHO_ARAMID, PRE_METHYLENE_META_ARAMID, PRE_METHYLENE_PARA_ARAMID, POST_METHYLENE_ORTHO_ARAMID, POST_METHYLENE_META_ARAMID, POST_METHYLENE_PARA_ARAMID, PRE_METHYLENE_POST_METHYLENE_ORTHO_ARAMID, PRE_METHYLENE_POST_METHYLENE_META_ARAMID, PRE_METHYLENE_POST_METHYLENE_PARA_ARAMID, CARBOHYDRATE, LIPID, TERPENE, NUCLEOTIDE_DIPHOSPHATE, SRI, TRIAZOLE_LINKER, METAL, SURFACE, WATER, TP3, VIRTUALIZABLE_BY_PACKER, SOLVENT, VIRTUAL_RESIDUE, VRT1, INVERTED_VIRTUAL_RESIDUE, LOWER_TERMINUS, UPPER_TERMINUS, BRANCH_POINT, TERMINUS, LOWERTERM_TRUNC, UPPERTERM_TRUNC, COARSE, ADDUCT, SC_ORBITALS, FRAGMENT, UPPERTERM_CAP, LOWERTERM_CAP, POLAR, HYDROPHOBIC, CHARGED, NEGATIVE_CHARGE, POSITIVE_CHARGE, AROMATIC, ALIPHATIC, CYCLIC, METALBINDING, SIDECHAIN_THIOL, DISULFIDE_BONDED, ELECTROPHILE, SIDECHAIN_AMINE, N_METHYLATED, MEMBRANE, PHOSPHONATE, PHOSPHONATE_UPPER, ACETYLATED_NTERMINUS, METHYLATED_CTERMINUS, DIMETHYLATED_CTERMINUS, ALPHA_AA, BETA_AA, GAMMA_AA, L_AA, D_AA, ACHIRAL_BACKBONE, ACHIRAL_SIDECHAIN, R_PEPTOID, S_PEPTOID, TAUTOMER, PURINE, PYRIMIDINE, L_RNA, D_RNA, TRIOSE, TETROSE, PENTOSE, HEXOSE, HEPTOSE, OCTOSE, NONOSE, ALDOSE, KETOSE, L_SUGAR, D_SUGAR, OXIROSE, OXETOSE, FURANOSE, PYRANOSE, SEPTANOSE, ALPHA_SUGAR, BETA_SUGAR, SIALIC_ACID, C1_MODIFIED, C2_MODIFIED, C3_MODIFIED, C4_MODIFIED, C5_MODIFIED, C6_MODIFIED, C7_MODIFIED, C8_MODIFIED, C9_MODIFIED, GLYCOSIDE, ALDONIC_ACID, URONIC_ACID, DEOXY_SUGAR, AMINO_SUGAR, ACETYLAMINO_SUGAR, ACETYL_SUGAR, R3PRIMEHYDROXYBUTYRYLAMINO_SUGAR, SULFATED_SUGAR, SULFOAMINO_SUGAR, C_METHYLATED_SUGAR, PHOSPHATE, SPINLABEL, DIAMAGNETIC, PARAMAGNETIC
  • logic: The logic to use for mutliple properties. Default is OR logic. Current choices are: [and_logic, or_logic]

See Also