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PerResidueSasaMetric

Author: Jared Adolf-Bryfogle (jadolfbr@gmail.com)

Autogenerated Tag Syntax Documentation:


Author: Jared Adolf-Bryfogle (jadolfbr@gmail.com) A metric for measuring per-residue SASA and adding it to the resulting score file. Modified 19 Aug. 2019 by Vikram K. Mulligan to add options for polar or hydrophobic SASA.

<PerResidueSasaMetric name="(&string;)" custom_type="(&string;)"
        output_as_pdb_nums="(false &bool;)" residue_selector="(&string;)"
        mode="(all_sasa &string;)" />
  • custom_type: Allows multiple configured SimpleMetrics of a single type to be called in a single RunSimpleMetrics and SimpleMetricFeatures. The custom_type name will be added to the data tag in the scorefile or features database.
  • output_as_pdb_nums: If outputting to scorefile use PDB numbering+chain instead of Rosetta (1 - N numbering)
  • residue_selector: If a residue selector is present, we only calculate and output metrics for the subset of residues selected.
  • mode: Sets the behaviour of the calculator (the subset of the SASA that is counted). Options include: all_sasa, polar_sasa, hydrophobic_sasa.

See Also