scripting_documentation/RosettaScripts/xsd/to_AddCDRProfileSetsOperation_type

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Autogenerated Tag Syntax Documentation:

---

Author: Jared Adolf-Bryfogle (jadolfbr@gmail.com) Add CDR profiles based on whole sequences.

<AddCDRProfileSetsOperation name="(&string;)" cdrs="(&string;)"
        limit_only_to_length="(false &bool;)"
        force_north_paper_db="(false &bool;)" use_outliers="(false &bool;)"
        include_native_restype="(true &bool;)"
        picking_rounds="(1 &non_negative_integer;)"
        cutoff="(10 &non_negative_integer;)" input_ab_scheme="(&string;)"
        cdr_definition="(&string;)" />

• cdrs: CDRs to apply this operation to.
• limit_only_to_length: Limit only to length, and not cluster
• force_north_paper_db: Force the use of the original db. Used for benchmarking.
• use_outliers: Use cluster outliers in the profiles
• include_native_restype: Include the native restype
• picking_rounds: Number of times we sample from the sequence distribution. Increase this to increase variability
• cutoff: Number of cluster members for which to use CDR profiles
• input_ab_scheme: The Input Antibody Scheme
• cdr_definition: The CDR Definition used

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