scripting_documentation/RosettaScripts/xsd/to_ProteinInterfaceDesign

Autogenerated Tag Syntax Documentation:

Restricts to the task that is the basis for protein-interface design.

<ProteinInterfaceDesign name="(&string;)"
        repack_chain1="(1 &non_negative_integer;)"
        repack_chain2="(1 &non_negative_integer;)"
        design_chain1="(0 &non_negative_integer;)"
        design_chain2="(1 &non_negative_integer;)"
        allow_all_aas="(0 &non_negative_integer;)"
        design_all_aas="(0 &non_negative_integer;)"
        jump="(1 &non_negative_integer;)"
        interface_distance_cutoff="(8.0 &real;)"
        modify_before_jump="(true &bool;)" modify_after_jump="(true &bool;)" />

repack_chain1: first chain to repack
repack_chain2: 2ndchain to repack
design_chain1: first chain to design
design_chain2: 2nd chain to design
allow_all_aas: allow all amino acid types for design. default: do not design to G/C/P
design_all_aas: design all amino acids. default: do not design G/C/P
jump: residue with the jump
interface_distance_cutoff: Cbeta distance of chain where design/repack is allowed on other chain
modify_before_jump: change residues before the jump. For instance, if you want set repack on chain2 interfacial residues to true, and the rest of chain2 to false, and yet not change the task for chain1, then use this taskoperation with modify_before_jump=0
modify_after_jump: change residues after the jump

scripting_documentation/RosettaScripts/xsd/to_ProteinInterfaceDesign_type