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Sticky topic Sticky: FAQ
by admin » Mon, 2010-08-30 01:38
1
22,824 by Sergey
Fri, 2015-09-04 16:14
Normal topic Segmentation fault encountered using Interface
by WenyuanW » Tue, 2024-04-02 13:41
0
123 by WenyuanW
Tue, 2024-04-02 13:41
Normal topic Minimizing a Symmetric Structure
by ammar.x.gilani » Wed, 2023-08-02 11:10
0
389 by ammar.x.gilani
Wed, 2023-08-02 11:10
Normal topic Set torsions for atoms in different residues
by mluengo » Fri, 2023-05-12 03:07
0
439 by mluengo
Fri, 2023-05-12 03:07
Normal topic Rotamers one- and two-body energies
by ajfmdm » Thu, 2024-04-04 00:48
3
536 by ajfmdm
Wed, 2024-05-29 05:39
Normal topic What is the meaning of "JUMP" in rigid.RigidBodyTransMover(pose,JUMP)?
by lanselibai » Sat, 2023-10-28 09:49
1
625 by rmoretti
Mon, 2023-10-30 08:43
Normal topic Collect data about the modelling
by Roberto » Thu, 2022-01-06 01:43
0
783 by Roberto
Thu, 2022-01-06 01:43
Normal topic Different results FastRelax pyrosetta vs rosetta_scripts
by karenjgonzalez » Tue, 2023-06-20 09:52
2
868 by karenjgonzalez
Fri, 2023-08-11 10:57
Normal topic Symmetry breaks due to small structure gaps
by dbiedermann » Mon, 2021-09-20 17:39
0
890 by dbiedermann
Mon, 2021-09-20 17:40
Normal topic How can I insert my variable length fragmrnts library into pyrosetta?
by michelleqyh » Tue, 2020-08-04 07:26
0
1,003 by michelleqyh
Tue, 2020-08-04 07:26
Normal topic Segfault when loading scorefxn() and load_from_pdb()
by mm » Wed, 2020-07-22 03:00
0
1,092 by mm
Wed, 2020-07-22 03:02
Normal topic WindowsError: [Error 32]
by jetu20 » Sun, 2020-10-11 21:02
0
1,129 by jetu20
Sun, 2020-10-11 21:02
Normal topic Python3.8 release for Mac download is a dead link
by noahC_noahDo » Fri, 2020-06-26 18:20
0
1,145 by noahC_noahDo
Fri, 2020-06-26 18:20
Normal topic Compile C++ Rosetta to Pyrosetta
by michelleqyh » Fri, 2020-08-21 08:44
0
1,153 by michelleqyh
Fri, 2020-08-21 08:44
Normal topic Structure not changing after pose.set_phi
by publicclass » Thu, 2020-11-05 09:34
0
1,195 by publicclass
Thu, 2020-11-05 09:34
Normal topic Affinity optimization with GreedyOptMutationMover
by wentlewi » Thu, 2020-05-07 08:29
0
1,217 by wentlewi
Thu, 2020-05-07 12:33
Normal topic any examples of calling SnugDock from pyrosetta?
by antonkulaga » Thu, 2021-12-23 16:13
1
1,293 by matteoferla
Mon, 2022-01-10 07:14
Normal topic Atom mapping in RMSD functions
by gkell » Tue, 2022-02-15 15:48
1
1,300 by rmoretti
Fri, 2022-02-18 10:23
Normal topic Pyrosetta imported after rdkit
by matteoferla » Sun, 2020-03-01 02:38
0
1,308 by matteoferla
Sun, 2020-03-01 02:38
Normal topic PyMOLMover object has no attribute 'link'
by nleroy » Mon, 2019-07-22 07:51
0
1,313 by nleroy
Mon, 2019-07-22 07:51
Normal topic How to fold-and-dock in PyRosetta?
by sarah_b » Thu, 2020-05-14 02:37
0
1,329 by sarah_b
Thu, 2020-05-14 02:37
Normal topic Post-traslational modifications
by diegoms » Wed, 2023-06-21 01:22
4
1,370 by diegoms
Wed, 2023-08-02 01:18
Normal topic rosetta.core.pack.pack_rotamers_setup(pose, score_fxn, task_design, rotsets) not working
by tschiex » Sun, 2017-11-05 08:29
0
1,379 by tschiex
Sun, 2017-11-05 08:29
Normal topic Molfile to params creating invalid params output
by edan » Sun, 2021-08-29 01:54
1
1,412 by tsztain
Sun, 2021-08-29 11:15
Normal topic Pyrosetta score protein structures with missing atoms in sidechain
by xuezhi » Fri, 2021-04-09 13:33
1
1,443 by matteoferla
Sat, 2021-04-10 07:18
Normal topic cleanATOM() for non-ideal amino acids
by ac.research » Thu, 2018-03-29 07:50
0
1,461 by ac.research
Thu, 2018-03-29 07:50
Normal topic Extending Pyrosetta toturials for docking by adding constraints
by nasim.soltani58 » Thu, 2020-11-26 13:16
1
1,498 by matteoferla
Wed, 2020-12-02 13:49
Normal topic trRosetta modelling with a ligand
by ShiranBZ » Tue, 2020-08-25 01:44
0
1,499 by ShiranBZ
Tue, 2020-08-25 01:44
Normal topic Challenge with applying AntibodyCDRGrafter method and MinMover method
by kylevaccaro » Sat, 2023-02-18 21:41
1
1,520 by nannemdp
Sun, 2023-02-19 12:05
Normal topic Explicit water
This topic has been moved to "Rosetta 3 - General " (View topic)
Normal topic Acessing energies terms from energy.show() table
by João Sartori » Mon, 2022-02-07 07:56
2
1,585 by João Sartori
Wed, 2022-02-09 04:35
Normal topic PyRosetta 1.1 for Windows?
by sylvia » Tue, 2010-02-09 16:06
0
1,617 by sylvia
Mon, 2014-04-21 06:47
Normal topic Hydrogen Bonding Distances and Atom identification
by kmolloy717 » Fri, 2021-06-25 08:15
1
1,639 by matteoferla
Wed, 2021-06-30 09:02
Normal topic Interface Analyzer with Glycans
by drewaight » Tue, 2020-06-09 20:06
1
1,641 by matteoferla
Wed, 2020-07-01 05:30
Normal topic PyRosetta v1.1
by jadolfbr » Tue, 2010-02-09 08:02
0
1,649 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic New files for loop modeling
by Victor » Fri, 2012-02-03 14:36
0
1,661 by Victor
Mon, 2014-04-21 06:47
Normal topic How does one convert a PDB file of an antibody to AHO scheme?
by kylevaccaro » Mon, 2023-02-13 18:14
2
1,679 by kylevaccaro
Wed, 2023-02-15 19:18
Normal topic DockingSlideIntoContact does not work
by batch2k » Wed, 2010-02-17 05:57
0
1,717 by batch2k
Mon, 2014-04-21 06:47
Normal topic Question Regarding Usage of Specific Rosetta Tools in PyRosetta
by jurkm » Thu, 2010-07-22 23:54
0
1,728 by jurkm
Mon, 2014-04-21 06:47
Normal topic Suggestion: setting Sphinx documentation to not skip __init__
by matteoferla » Mon, 2020-08-24 09:02
0
1,736 by matteoferla
Mon, 2020-08-24 09:02
Normal topic Announcements
by sid » Fri, 2009-10-02 08:54
0
1,737 by sid
Mon, 2014-04-21 06:47
Normal topic building a 77 amino acid long fragment
by tevang » Fri, 2010-02-19 06:37
0
1,750 by tevang
Mon, 2014-04-21 06:47
Normal topic pyrosetta die slow
by Eden » Sun, 2021-06-13 00:05
2
1,751 by Eden
Mon, 2021-06-14 23:10
Normal topic "Server Could Not Be Reached" although I have an Internet connection
by epi89 » Mon, 2020-09-28 21:32
1
1,765 by smlewis
Tue, 2020-09-29 12:00
Normal topic How to tell where and what fragment or rotamer was inserted?
by charlie.strauss » Wed, 2010-01-27 10:36
0
1,768 by charlie.strauss
Mon, 2014-04-21 06:47
Normal topic Gunn fragment insertion
by jadolfbr » Sun, 2010-02-28 09:39
0
1,770 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic How to relax glycans after glycosylating sites on a pose?
by sdtruong » Mon, 2021-03-22 09:44
2
1,785 by sdtruong
Mon, 2021-03-22 17:05
Normal topic PyRosetta version 2.011 for Mac/Linux is ready to download!
by Sergey » Mon, 2011-11-21 08:51
0
1,804 by Sergey
Mon, 2014-04-21 06:47
Normal topic Passing a dictionary from pyrosetta to rosetta
by SenyorDrew » Mon, 2017-11-13 11:33
1
1,809 by rmoretti
Fri, 2017-12-01 10:10
Normal topic Protocol for adding/mutating non-canonical AA
by joeri » Thu, 2021-03-25 08:14
1
1,810 by matteoferla
Tue, 2021-03-30 08:20
Normal topic Score bonus to hbond
by yijietseng » Fri, 2019-07-05 12:28
1
1,813 by rmoretti
Tue, 2019-07-09 09:42
Normal topic analysis utilities for trajectories
by cbala » Mon, 2010-06-14 02:58
0
1,827 by cbala
Mon, 2014-04-21 06:47
Normal topic How do I insert or delete residues into specific locations?
by Mgerber@mail.yu.edu » Sun, 2020-12-20 15:03
1
1,828 by matteoferla
Tue, 2021-01-05 03:53
Normal topic Can we have email alert for the reply?
by lanselibai » Wed, 2014-08-13 13:24
0
1,833 by lanselibai
Wed, 2014-08-13 13:24
Normal topic Applying RMSD constraints using pyrosetta or Rosettascripts
by chenna » Thu, 2023-02-09 05:37
2
1,837 by chenna
Fri, 2023-02-10 05:37
Normal topic residue selection / secondary structure constraints
by sharang » Thu, 2010-08-05 10:16
0
1,860 by sharang
Mon, 2014-04-21 06:47
Normal topic Determine residues where Backrub Mover is applied
by jferrie » Fri, 2017-10-27 08:19
1
1,865 by rmoretti
Fri, 2017-12-01 10:25
Normal topic Less silly way to get number of iterations of Relax
by matteoferla » Tue, 2021-07-20 07:00
2
1,872 by matteoferla
Tue, 2021-07-20 13:44
Normal topic Architecture question
by jwillis » Thu, 2010-02-25 09:43
0
1,882 by jwillis
Mon, 2014-04-21 06:47
Normal topic Windows version of PyRosetta 2.0 is ready for download!
by Sergey » Fri, 2011-02-11 15:58
0
1,884 by Sergey
Mon, 2014-04-21 06:47
Normal topic Non-standard amino acids
by mark.wilson » Mon, 2010-08-02 12:13
0
1,890 by mark.wilson
Mon, 2014-04-21 06:47
Normal topic Distance constraints for amino acids pairs
by blubbi » Tue, 2010-05-18 05:39
0
1,891 by blubbi
Mon, 2014-04-21 06:47
Normal topic Minimization not changing jump edge vector length
by bio_james » Tue, 2017-12-12 09:32
1
1,917 by rmoretti
Sat, 2017-12-16 10:47
Normal topic small molecule docking
by sharang » Mon, 2010-08-02 14:57
0
1,918 by sharang
Mon, 2014-04-21 06:47
Normal topic Problems with building bindings.
by AndrewBworth » Thu, 2010-02-04 17:26
0
1,952 by AndrewBworth
Mon, 2014-04-21 06:47
Normal topic Adding Custom AtomTypes to Pyrosetta
by garrettameek » Wed, 2019-03-13 15:06
1
1,971 by rmoretti
Thu, 2019-05-09 15:06
Normal topic FastRelax results in bad structure
by Eden » Mon, 2021-04-26 08:39
2
1,984 by Eden
Wed, 2021-06-23 01:13
Normal topic Error with importing the pdb file
by nasim.soltani58 » Fri, 2020-12-18 22:46
1
2,005 by matteoferla
Tue, 2021-01-05 04:05
Normal topic Updating Coords
by jadolfbr » Sat, 2010-01-30 10:33
0
2,009 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Assesing the docking
by nasim.soltani58 » Sat, 2020-12-05 21:19
2
2,021 by nasim.soltani58
Tue, 2020-12-08 22:44
Normal topic PyRosetta on a HPC
by ac.research » Thu, 2019-03-14 02:00
1
2,026 by rmoretti
Wed, 2019-07-10 10:17
Normal topic Docking between peptide and lipid-biayer
by sprinkle166 » Thu, 2017-10-26 08:35
1
2,054 by rmoretti
Fri, 2017-12-01 10:34
Normal topic Different types of MinMover
by nasim.soltani58 » Sun, 2020-12-20 11:44
2
2,058 by nasim.soltani58
Tue, 2020-12-22 13:37
Normal topic London
by MarkW » Sun, 2015-02-08 14:14
0
2,083 by MarkW
Sun, 2015-02-08 14:14
Normal topic Changing the membrane Thickness (THKN)
by jlapin » Mon, 2018-11-12 06:32
1
2,096 by ralford
Wed, 2018-12-19 03:20
Normal topic Protocol for adding/mutating non-canonical AA
by joeri » Thu, 2021-03-25 08:14
2
2,100 by vmulligan
Mon, 2021-03-29 10:39
Normal topic Folding Video
by ac.research » Sat, 2018-05-12 09:19
1
2,108 by rmoretti
Sat, 2018-06-30 02:38
Normal topic "Server Could Not Be Reached" although I have an Internet connection
by aushawxian » Sun, 2018-01-28 20:21
1
2,111 by walcob
Mon, 2018-01-29 11:22
Normal topic How can I automate mutations with PyRosetta or other Rosetta software?
by archaeopteryx » Mon, 2023-07-03 19:35
7
2,113 by arjan-hada
Sat, 2024-01-27 05:48
Normal topic Pyrosetta protocol to move protein-peptide docked complex closer to active site.
by eduardoftoliveira » Fri, 2018-06-29 02:50
0
2,117 by eduardoftoliveira
Fri, 2018-06-29 03:46
Normal topic Libmini crashes after protocol run
by whooper » Tue, 2017-01-31 09:48
1
2,126 by Sergey
Tue, 2017-01-31 13:42
Normal topic Need help figuring out the meaning and cause of an error
by AleksanderK » Fri, 2019-05-03 11:02
1
2,127 by rmoretti
Thu, 2019-05-09 14:32
Normal topic pose_from_rcsb error
by criss.hartzell » Wed, 2020-04-22 15:12
1
2,165 by matteoferla
Thu, 2020-04-30 12:04
Normal topic Glycan minimization
by seanle24245 » Thu, 2016-10-06 13:51
1
2,172 by Labonte
Thu, 2016-10-06 14:05
Normal topic Questions of Cartesian_ddG calculation in PyRosetta
by CKS2001 » Fri, 2022-01-07 01:36
2
2,181 by CKS2001
Sat, 2022-01-08 02:14
Normal topic GenericMonteCarloMover accept/reject moves
by ac.research » Fri, 2018-06-08 06:04
1
2,189 by rmoretti
Sat, 2018-06-30 02:37
Normal topic RemodelMover() and the blueprint file
by ac.research » Wed, 2018-06-27 03:55
1
2,206 by rmoretti
Sat, 2018-06-30 02:38
Normal topic dump_pdb problems
by srballard » Fri, 2010-05-28 14:04
0
2,209 by srballard
Mon, 2014-04-21 06:47
Normal topic Scoring with CCP4 electron density maps constraints
by xfliu » Thu, 2012-05-03 03:30
0
2,211 by xfliu
Mon, 2014-04-21 06:47
Normal topic how to use constrains in PyRosetta?
by ast » Mon, 2011-09-05 07:22
0
2,228 by ast
Mon, 2014-04-21 06:47
Normal topic How does min_mover work?
by anidude » Fri, 2022-03-04 07:30
1
2,235 by matteoferla
Sun, 2022-03-20 02:53
Normal topic restricted fast relax changes whole structure?
by patcD » Wed, 2021-08-25 02:05
2
2,252 by patcD
Wed, 2021-09-01 03:30
Normal topic Best way to store a pose by Pyrosetta for Pyrosetta
by matteoferla » Wed, 2021-04-07 06:50
0
2,263 by matteoferla
Wed, 2021-04-07 06:50
Normal topic task_pack.restrict_to_repacking() not working
by lanselibai » Mon, 2014-08-11 08:06
1
2,266 by rmoretti
Tue, 2014-08-12 08:35
Normal topic How to call SnugDock from PyRosetta
by SenyorDrew » Tue, 2016-06-21 07:28
1
2,279 by jeliazkov
Fri, 2016-07-01 08:42
Normal topic ClassicRelax with ligand
by S » Mon, 2010-09-27 07:55
1
2,298 by smlewis
Mon, 2014-04-21 06:47
Normal topic Motif Graft Mover error
by ac.research » Tue, 2019-03-26 13:25
1
2,299 by rmoretti
Thu, 2019-05-09 15:56
Normal topic [Solved] Docking to a trimer
by batch2k » Wed, 2010-02-17 02:18
1
2,299 by batch2k
Mon, 2014-04-21 06:47
Normal topic Convert Rotamer Vector to Chi Angles
by L-Allanine » Sat, 2016-07-30 09:16
1
2,303 by rmoretti
Mon, 2016-09-05 10:35
Normal topic segfault in loop
by reve_etrange » Sat, 2010-02-13 21:49
1
2,313 by reve_etrange
Mon, 2014-04-21 06:47

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