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Normal topic Displaying side-chain rotamers in PyMol
by ajasja » Wed, 2014-09-24 08:57 		0
 2,930 by ajasja
Wed, 2014-09-24 08:57
Normal topic Getting chi rotamers
by ajasja » Tue, 2014-08-26 12:11 		3
 4,856 by rmoretti
Tue, 2014-09-23 08:36
Hot topic Making mutations in PyRosetta?
by thorx020 » Thu, 2012-08-09 09:24 		15
 21,386 by ajasja
Mon, 2014-09-22 10:17
Normal topic Forum webpage not working
by ajasja » Mon, 2014-09-22 06:14 		2
 2,907 by ajasja
Mon, 2014-09-22 09:53
Normal topic Large Memory usage in Windows r10 Build
by ajasja » Fri, 2014-08-22 09:09 		4
 7,387 by ajasja
Mon, 2014-09-22 09:51
Normal topic Viewing and modifying hydrogen bond detection criteria
by promero » Tue, 2014-09-16 15:26 		1
 3,131 by rmoretti
Wed, 2014-09-17 07:29
Normal topic Inconsistencies in full atom energy calculations
by dsim » Tue, 2014-07-29 06:02 		4
 4,750 by dsim
Mon, 2014-09-15 07:47
Normal topic Error in loop modeling protocol its showing error "NameError: name 'ccd_closure' is not defined"
by jai_INMAS » Sun, 2013-10-20 05:22 		1
 2,581 by Labonte
Mon, 2014-09-08 09:13
Normal topic Missing residue coordinates in PDB files
by lanselibai » Thu, 2014-09-04 07:34 		1
 5,524 by rmoretti
Thu, 2014-09-04 11:36
Normal topic Can I export command line & result from iPython PyRosetta shell to a text file?
by lanselibai » Mon, 2014-08-25 04:05 		2
 3,802 by lanselibai
Tue, 2014-08-26 01:49
Normal topic New Windows build is available for download
by Sergey » Fri, 2014-07-18 13:50 		2
 4,094 by ajasja
Fri, 2014-08-22 08:32
Normal topic Nonstandard residue parameters fail
by lah435 » Wed, 2014-08-06 17:53 		2
 3,862 by lah435
Mon, 2014-08-18 17:23
Normal topic mutate_residue not working
by lanselibai » Mon, 2014-08-11 03:55 		7
 8,729 by lanselibai
Sun, 2014-08-17 07:30
Normal topic Calculating sasa per atom and atomid_map
by ioannis.f » Wed, 2014-08-13 05:26 		1
 2,709 by Sergey
Thu, 2014-08-14 11:54
Normal topic Can we have email alert for the reply?
by lanselibai » Wed, 2014-08-13 13:24 		0
 1,794 by lanselibai
Wed, 2014-08-13 13:24
Normal topic task_pack.restrict_to_repacking() not working
by lanselibai » Mon, 2014-08-11 08:06 		1
 2,213 by rmoretti
Tue, 2014-08-12 08:35
Normal topic Argument error when running D120_Ligand_interface.py
by piladam » Wed, 2014-07-09 10:43 		5
 7,235 by rmoretti
Mon, 2014-07-21 11:15
Normal topic pose_from_sequence with modified residue
by nawsad » Wed, 2014-06-25 02:59 		4
 5,242 by nawsad
Sun, 2014-07-13 00:49
Normal topic Approximating CHARMM energy by the rosetta scoring function
by ajasja » Fri, 2014-06-20 02:16 		4
 5,895 by ajasja
Thu, 2014-07-03 05:53
Normal topic Problems when inserting spin-label R1A
by ajasja » Fri, 2014-06-27 04:14 		2
 3,460 by ajasja
Thu, 2014-07-03 05:36
Normal topic Capturing the output of scorefxn.show(pose)
by ajasja » Fri, 2014-06-20 05:30 		2
 4,002 by ajasja
Sat, 2014-06-21 11:57
Normal topic Getting which rigid body a residue belongs to?
by JuliusSu » Thu, 2014-04-17 21:12 		3
 4,153 by jadolfbr
Mon, 2014-04-21 17:28
Normal topic Quadratic Function for Distance Constraints?
by protos_heis » Mon, 2014-01-27 06:21 		4
 4,482 by protos_heis
Mon, 2014-04-21 06:48
Normal topic How to calculate the pairwise rotamer-to-rotamer energy table between mutable residues allowed to change to all amino acid types
by AyushGoyal » Wed, 2014-01-22 16:24 		7
 9,111 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Amino acid modifications: retinal linked to lysine
by tsikosek » Tue, 2014-01-21 12:52 		1
 3,230 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Rotamer information from pose
by AyushGoyal » Wed, 2014-01-15 14:37 		7
 9,282 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Alignment and RMSD
by ñ » Wed, 2013-11-27 12:43 		5
 10,650 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Symmetric pose initialization fails
by gudmal » Tue, 2013-11-26 06:42 		3
 3,951 by Sergey
Mon, 2014-04-21 06:48
Normal topic GDT_TS how can I get it with pyrosetta?
by oppopomoz » Thu, 2014-01-09 02:51 		1
 2,735 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Fragments file
by Run » Tue, 2013-11-26 02:40 		4
 5,135 by rmoretti
Mon, 2014-04-21 06:48
Normal topic is_aromatic function
by jadolfbr » Mon, 2013-12-02 19:31 		2
 2,995 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic loop modeling error 'CcdLoopClosureMover' object is not callable
by jai_INMAS » Tue, 2013-10-22 01:49 		2
 3,496 by jai_INMAS
Mon, 2014-04-21 06:48
Normal topic change dihedral angles of any residue
by bharat_46010 » Fri, 2013-11-15 00:30 		3
 5,338 by bharat_46010
Mon, 2014-04-21 06:48
Normal topic Documentation of ``mysterious'' protocols
by ñ » Wed, 2013-10-30 08:19 		3
 4,324 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Error in loop modeling protocol
by jai_INMAS » Fri, 2013-10-18 07:08 		5
 6,125 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Regarding the Documentation of Rosetta and PyRosetta
by jai_INMAS » Tue, 2013-10-22 23:41 		3
 4,277 by jai_INMAS
Mon, 2014-04-21 06:48
Normal topic Script running, but returns no results
by chinhsutran » Fri, 2013-11-22 06:25 		1
 2,314 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Problems with SmoothFragmentMover
by epalovcak » Wed, 2013-10-02 09:20 		3
 4,538 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Packing Fraction of atoms in a closed loop or turn
by bharat_46010 » Fri, 2013-08-09 17:40 		1
 2,959 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Scoring after switching back to fullatom
by thorx020 » Thu, 2013-10-03 08:06 		1
 2,330 by jadolfbr
Mon, 2014-04-21 06:48
Hot topic Energy Minimization
by bharat_46010 » Wed, 2013-07-31 20:45 		24
 31,279 by rmoretti
Mon, 2014-04-21 06:48
Normal topic hydrogen bond parameters used in detecting h-bonds by pyrosetta
by bharat_46010 » Sun, 2013-07-21 23:44 		1
 2,697 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Questions on rotamer-rotamer energies
by pachecoj » Fri, 2013-07-26 05:01 		3
 4,572 by rmoretti
Mon, 2014-04-21 06:48
Normal topic how to add water into protein interface using solvated rotamers?
by chinhsutran » Sun, 2013-07-21 20:25 		1
 2,591 by smlewis
Mon, 2014-04-21 06:48
Normal topic Trying to call pack_rotamers_setup()
by pachecoj » Tue, 2013-07-23 16:07 		2
 3,470 by Sergey
Mon, 2014-04-21 06:48
Normal topic Create PDB for heterodimer
by pachecoj » Mon, 2013-08-05 19:11 		1
 5,822 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Calculate residue-residue pairwise energies
by pachecoj » Tue, 2013-07-23 04:51 		4
 6,768 by Sergey
Mon, 2014-04-21 06:48
Normal topic MakeRotLib documentation for Pyrosetta
by ltassoulas » Sat, 2013-07-06 16:15 		1
 2,571 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Does Rosetta scoring function can distinguish good structure from bad one?
by Victor » Sun, 2013-06-16 21:11 		4
 4,730 by Victor
Mon, 2014-04-21 06:48
Normal topic No pdb output file when running ab initio modeling
by bunyaviridae » Thu, 2013-06-20 01:33 		1
 2,768 by rmoretti
Mon, 2014-04-21 06:48
Normal topic how can we calculate Rosetta score on some decoy set?
by mirzaie » Wed, 2013-06-19 08:43 		13
 14,314 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic GPU computing and PyRosetta
by oppopomoz » Thu, 2013-07-11 05:55 		1
 4,617 by rmoretti
Mon, 2014-04-21 06:48
Normal topic non canonical aa mutations/force fields/pyrosetta
by Anouk » Wed, 2013-06-19 01:51 		12
 13,494 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Initializing DockDesignParser in PyRosetta
by LiorZ » Mon, 2013-04-22 01:56 		6
 6,567 by LiorZ
Mon, 2014-04-21 06:47
Hot topic HBondEnergy
by bharat_46010 » Wed, 2013-05-15 19:03 		15
 17,415 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Fragments picker: -nohom option seems not to work
by oppopomoz » Tue, 2013-05-14 06:31 		1
 2,731 by linucks
Mon, 2014-04-21 06:47
Normal topic Add new atom
by eberhardt » Thu, 2013-03-14 02:01 		4
 7,138 by eberhardt
Mon, 2014-04-21 06:47
Normal topic PyRosetta coding subtleties
by lah435 » Wed, 2013-03-27 02:59 		2
 4,435 by Sergey
Mon, 2014-04-21 06:47
Normal topic Which score4?
by oppopomoz » Tue, 2013-03-12 06:21 		4
 6,293 by smlewis
Mon, 2014-04-21 06:47
Normal topic Score of the protein without ligand
by eberhardt » Thu, 2013-03-21 07:29 		5
 6,396 by eberhardt
Mon, 2014-04-21 06:47
Normal topic Score2 and Score5...aren't hey meant to be different?
by oppopomoz » Wed, 2013-02-20 03:31 		2
 4,030 by smlewis
Mon, 2014-04-21 06:47
Normal topic Simple mover that holds lowest energy pose
by jadolfbr » Fri, 2013-03-15 13:23 		3
 3,848 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic adding nucleotides to a dna model
by jadolfbr » Wed, 2012-12-05 11:40 		3
 4,726 by smlewis
Mon, 2014-04-21 06:47
Normal topic Missing movers in OSX PyRosetta
by lah435 » Fri, 2012-11-16 15:45 		2
 3,743 by lah435
Mon, 2014-04-21 06:47
Normal topic Rotamer Libraries in Pyrosetta
by protos_heis » Fri, 2013-01-18 12:02 		8
 10,800 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Error when importing protocols.simple_filters
by xfliu » Tue, 2012-10-16 13:37 		8
 7,601 by xfliu
Mon, 2014-04-21 06:47
Normal topic How to pop off terminus variants
by xfliu » Mon, 2012-09-03 03:12 		2
 3,232 by xfliu
Mon, 2014-04-21 06:47
Normal topic D070_Refinement.py
by thorx020 » Fri, 2012-09-14 06:40 		1
 2,568 by smlewis
Mon, 2014-04-21 06:47
Hot topic Monte Carlo usage?
by atruong » Tue, 2012-08-28 13:24 		29
 28,408 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Send the output of PyRosetta to a PyMOLPyRosettaServer on a remote computer?
by lah435 » Mon, 2012-09-10 16:06 		10
 10,707 by ggyimesi
Mon, 2014-04-21 06:47
Normal topic Rosetta score vs Experiment
by thorx020 » Tue, 2012-09-04 12:38 		3
 6,723 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to read a silent file ?
by Anonymous » Wed, 2012-06-27 09:34 		12
 11,963 by Anonymous
Mon, 2014-04-21 06:47
Normal topic problems with low-resolution loop refinemet (LoopMover_Perturb_CCD)
by aloctavodia » Thu, 2012-07-26 06:51 		9
 8,766 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Dock antibody at the epitope of antigen
by styang » Fri, 2012-06-22 05:44 		3
 5,533 by smlewis
Mon, 2014-04-21 06:47
Normal topic Output different favored solutions with PackRotamersMover design
by xfliu » Fri, 2012-07-13 06:23 		5
 6,078 by smlewis
Mon, 2014-04-21 06:47
Normal topic Allowing cysteines to repack
by eyliaw » Thu, 2012-07-05 14:46 		3
 4,228 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Help with pyRosetta python scripting for protein manipulation
by pepfolder » Thu, 2012-05-31 14:01 		5
 6,469 by pepfolder
Mon, 2014-04-21 06:47
Normal topic Unpredictible amino acid replacements
by Victor » Wed, 2012-05-09 09:21 		6
 6,146 by aloctavodia
Mon, 2014-04-21 06:47
Normal topic Error in core/scoring/methods/VDW_Energy.cc line: 169
by pepfolder » Thu, 2012-05-31 11:13 		2
 4,506 by pepfolder
Mon, 2014-04-21 06:47
Normal topic Scoring with CCP4 electron density maps constraints
by xfliu » Thu, 2012-05-03 03:30 		0
 2,161 by xfliu
Mon, 2014-04-21 06:47
Normal topic Customize Rosetta codes and make it accessible to PyRosetta
by xfliu » Thu, 2012-05-24 06:27 		7
 6,541 by Sergey
Mon, 2014-04-21 06:47
Normal topic How to optimize the orientations of polar hydrogens in PyRosetta
by xfliu » Sat, 2012-04-28 16:33 		5
 5,946 by xfliu
Mon, 2014-04-21 06:47
Normal topic Fragment File Reading problem
by Nuria » Tue, 2012-06-12 13:42 		1
 2,497 by smlewis
Mon, 2014-04-21 06:47
Normal topic BackrubMover options
by AOK » Thu, 2012-05-24 05:06 		5
 5,514 by AOK
Mon, 2014-04-21 06:47
Normal topic Individual residue repacking causes segmentation fault or "ERROR: seqpos >= 1 ERROR:: Exit from: src/core/conformation/Confo..."
by msellers » Wed, 2012-04-04 12:27 		5
 6,130 by smlewis
Mon, 2014-04-21 06:47
Normal topic Energy of individual loop/region
by jadolfbr » Mon, 2012-04-02 13:15 		3
 3,644 by smlewis
Mon, 2014-04-21 06:47
Normal topic How can i introduce hydrogen bond as constraint?
by sp1020 » Mon, 2012-04-02 05:12 		1
 3,041 by smlewis
Mon, 2014-04-21 06:47
Normal topic Memory Issues PyRosetta?
by ast » Sat, 2012-03-24 03:21 		1
 2,380 by smlewis
Mon, 2014-04-21 06:47
Normal topic RNA docking
by eschulz » Tue, 2012-02-28 03:04 		1
 4,602 by smlewis
Mon, 2014-04-21 06:47
Normal topic Error getting MinMover attributes
by assaff » Sun, 2012-03-25 10:54 		6
 6,233 by smlewis
Mon, 2014-04-21 06:47
Normal topic option removal/KIC
by jadolfbr » Thu, 2012-02-02 16:35 		6
 5,843 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Cannot get PyMOL_Observer to work on MacOS
by cno » Thu, 2012-02-16 09:15 		1
 2,440 by Sergey
Mon, 2014-04-21 06:47
Normal topic Altering Score/EMapVector
by mmertens » Fri, 2012-01-27 09:33 		5
 5,165 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Cannot get PyMOL_mover to work on MacOS
by cno » Fri, 2012-02-10 07:24 		2
 4,447 by cno
Mon, 2014-04-21 06:47
Normal topic rmsd and Lrmsd in loop modeling
by Victor » Tue, 2012-01-24 09:52 		3
 4,694 by Victor
Mon, 2014-04-21 06:47
Normal topic New files for loop modeling
by Victor » Fri, 2012-02-03 14:36 		0
 1,619 by Victor
Mon, 2014-04-21 06:47
Normal topic preparation the fragment files for mutants
by Victor » Wed, 2012-02-22 11:04 		3
 3,635 by smlewis
Mon, 2014-04-21 06:47
Normal topic Go parallel
by assignfit » Tue, 2011-11-29 10:47 		4
 4,790 by smlewis
Mon, 2014-04-21 06:47
Normal topic Windows native build of PyRosetta 2.011 is ready for download!
by Sergey » Mon, 2011-11-21 18:25 		1
 2,688 by Sergey
Mon, 2014-04-21 06:47
Normal topic PyRosetta version 2.011 for Mac/Linux is ready to download!
by Sergey » Mon, 2011-11-21 08:51 		0
 1,761 by Sergey
Mon, 2014-04-21 06:47
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