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PyRosetta - General

Topic / Topic starter Replies Views Last postsort ascending
Normal topic Go parallel
by assignfit » Tue, 2011-11-29 10:47
4
4,791 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to use constrains in PyRosetta?
by ast » Mon, 2011-09-05 07:22
0
2,181 by ast
Mon, 2014-04-21 06:47
Normal topic Errors when movers put in a function
by rfschleif » Sat, 2011-10-08 08:41
5
5,178 by msellers
Mon, 2014-04-21 06:47
Normal topic input_pdb
by evo_umich » Sat, 2011-10-01 14:20
3
4,777 by evo_umich
Mon, 2014-04-21 06:47
Normal topic PyRosetta license
by AOK » Fri, 2011-11-11 01:20
1
2,557 by JeffreyGray
Mon, 2014-04-21 06:47
Normal topic libmini.dylib
by evo_umich » Fri, 2011-09-23 14:08
2
3,550 by evo_umich
Mon, 2014-04-21 06:47
Normal topic ∆G calculation script for protein and mutation of AA at each residue
by ara » Tue, 2011-10-25 13:57
6
8,404 by ara
Mon, 2014-04-21 06:47
Normal topic read parameters of metal ions
by Stefan » Tue, 2011-07-19 08:38
2
4,187 by Stefan
Mon, 2014-04-21 06:47
Normal topic how to realize a free bb design? PackMover=fixed bb!
by ast » Wed, 2011-08-31 09:41
1
3,539 by rmoretti
Mon, 2014-04-21 06:47
Hot topic Creating a vector1 of AtomID objects
by msellers » Mon, 2011-07-18 06:24
19
17,473 by msellers
Mon, 2014-04-21 06:47
Normal topic Using pose.set_xyz() to move chains causes increase in only pro_close energy
by msellers » Mon, 2011-07-25 06:57
3
4,485 by msellers
Mon, 2014-04-21 06:47
Normal topic protein structure prediction
by ravi1709 » Thu, 2011-07-28 00:05
1
2,601 by smlewis
Mon, 2014-04-21 06:47
Normal topic (1) Score pose, (2) move atom, (3) score pose
by msellers » Fri, 2011-07-15 11:04
6
6,224 by msellers
Mon, 2014-04-21 06:47
Normal topic Foldtree setup, jump problem in PyRosetta 2.0
by msellers » Thu, 2011-07-21 12:00
2
4,090 by msellers
Mon, 2014-04-21 06:47
Normal topic Neutralize the C and N termini
by rosettauser » Mon, 2011-07-25 07:24
1
2,693 by smlewis
Mon, 2014-04-21 06:47
Normal topic Charmm, hydroxyproline, hydrogen atom ID
by rfschleif » Tue, 2011-07-12 11:26
1
3,637 by rfschleif
Mon, 2014-04-21 06:47
Normal topic Jump question
by rfschleif » Wed, 2011-06-15 14:00
1
2,853 by smlewis
Mon, 2014-04-21 06:47
Normal topic Deprotonated LYS
by Arik » Wed, 2011-06-22 16:34
3
4,834 by smlewis
Mon, 2014-04-21 06:47
Normal topic Failure appending a residue
by rfschleif » Thu, 2011-06-16 10:53
2
3,865 by smlewis
Mon, 2014-04-21 06:47
Normal topic Deleting residue one produces a segmentation fault
by rfschleif » Thu, 2011-06-16 07:02
1
2,419 by smlewis
Mon, 2014-04-21 06:47
Normal topic Pyrosetta energy function
by somayyehzangooei » Mon, 2011-05-09 08:20
6
8,207 by smlewis
Mon, 2014-04-21 06:47
Normal topic Minimization question
by rfschleif » Wed, 2011-05-25 06:59
14
13,393 by Sergey
Mon, 2014-04-21 06:47
Normal topic Define custom potential?
by rfschleif » Fri, 2011-05-06 11:25
2
3,829 by weitzner
Mon, 2014-04-21 06:47
Normal topic Pyrosetta 2.0 - Dunbrak library binary not loading - strange repacking score
by msellers » Wed, 2011-05-11 06:24
3
4,302 by smlewis
Mon, 2014-04-21 06:47
Normal topic Dunbrack Library
by jadolfbr » Tue, 2011-05-10 13:59
3
4,235 by weitzner
Mon, 2014-04-21 06:47
Normal topic adding coordinate constraints
by jtmacd » Tue, 2011-04-12 04:51
11
12,180 by jtmacd
Mon, 2014-04-21 06:47
Hot topic SequenceRelax on a loop
by jtmacd » Mon, 2011-04-11 07:53
15
13,739 by ñ
Mon, 2014-04-21 06:47
Normal topic interaction energies between atoms
by Stefan » Thu, 2011-04-14 06:15
3
6,000 by smlewis
Mon, 2014-04-21 06:47
Normal topic Pyrosetta2
by bharat_46010 » Mon, 2011-02-28 05:00
1
2,598 by Sergey
Mon, 2014-04-21 06:47
Normal topic Strange fold tree problem with classic and fast relax
by jadolfbr » Mon, 2011-03-21 11:58
4
5,306 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic JobDistributor Bug
by brettth » Fri, 2011-03-11 07:00
1
3,278 by smlewis
Mon, 2014-04-21 06:47
Normal topic Username and Password for download link?
by juden99 » Thu, 2011-02-17 03:30
3
4,015 by juden99
Mon, 2014-04-21 06:47
Normal topic Peptide design
by AOK » Thu, 2011-02-03 11:35
3
4,848 by smlewis
Mon, 2014-04-21 06:47
Normal topic Windows version of PyRosetta 2.0 is ready for download!
by Sergey » Fri, 2011-02-11 15:58
0
1,850 by Sergey
Mon, 2014-04-21 06:47
Normal topic How to fold membrane protein in PyRosetta?
by assignfit » Fri, 2011-02-25 21:39
3
4,275 by assignfit
Mon, 2014-04-21 06:47
Normal topic Rosetta Docking server
by hourosetta » Fri, 2011-02-11 08:36
1
3,415 by smlewis
Mon, 2014-04-21 06:47
Normal topic Concatenate Pose
by jadolfbr » Sat, 2011-02-19 21:12
8
9,309 by smlewis
Mon, 2014-04-21 06:47
Normal topic PyRosetta 2.0 Beta Strand Build
by Qulprit » Tue, 2011-02-08 11:30
1
7,298 by weitzner
Mon, 2014-04-21 06:47
Normal topic De novo loop modeling using pyrosetta
by bharat_46010 » Sun, 2011-01-16 17:38
4
5,827 by Sergey
Mon, 2014-04-21 06:47
Normal topic How to set options under PyRosetta
by lennylv » Thu, 2011-01-06 18:11
1
3,773 by Sergey
Mon, 2014-04-21 06:47
Normal topic The Beta version of PyRosetta 2.0 is ready for download!
by Sergey » Mon, 2011-01-24 10:12
9
8,556 by drluca77
Mon, 2014-04-21 06:47
Normal topic Segmentation fault when reading VMD PDB
by msellers » Mon, 2011-01-03 07:14
6
9,253 by smlewis
Mon, 2014-04-21 06:47
Normal topic Executing the mc simulation of polyalanine fragment
by bharat_46010 » Mon, 2011-01-17 19:18
8
8,337 by smlewis
Mon, 2014-04-21 06:47
Normal topic Fold tree not correct for multi-chain partners
by msellers » Fri, 2010-12-10 05:35
6
7,081 by msellers
Mon, 2014-04-21 06:47
Normal topic Interface Design
by brettth » Wed, 2010-12-08 07:25
2
5,105 by SunH
Mon, 2014-04-21 06:47
Normal topic Specifying disulfide bonds
by msellers » Thu, 2010-12-02 10:38
1
4,010 by msellers
Mon, 2014-04-21 06:47
Normal topic Units of kT for MC mover
by msellers » Fri, 2010-12-10 05:40
1
3,907 by smlewis
Mon, 2014-04-21 06:47
Normal topic fragment for polyAAA
by knutjbj » Mon, 2010-11-29 08:23
1
2,484 by smlewis
Mon, 2014-04-21 06:47
Normal topic ClassicRelax with ligand
by S » Mon, 2010-09-27 07:55
1
2,246 by smlewis
Mon, 2014-04-21 06:47
Normal topic Constraint files, section formatted
by srballard » Fri, 2010-11-05 11:55
2
2,982 by drluca77
Mon, 2014-04-21 06:47
Normal topic Adding energies of residues doesnt add up to energy of the entire protein
by astrofunk » Tue, 2010-09-14 11:24
1
3,188 by smlewis
Mon, 2014-04-21 06:47
Normal topic Fundamental methods: pose.residue().total_atom(), pose.atom(#) ?
by msellers » Mon, 2010-11-01 10:53
1
2,631 by smlewis
Mon, 2014-04-21 06:47
Normal topic Boost.Python C++/PyRosetta interop
by gipsonb » Wed, 2010-10-06 15:15
1
2,749 by gipsonb
Mon, 2014-04-21 06:47
Normal topic Non-standard amino acids
by mark.wilson » Mon, 2010-08-02 12:13
0
1,854 by mark.wilson
Mon, 2014-04-21 06:47
Normal topic residue selection / secondary structure constraints
by sharang » Thu, 2010-08-05 10:16
0
1,822 by sharang
Mon, 2014-04-21 06:47
Normal topic Parallel processing?
by mark.wilson » Mon, 2010-07-26 15:12
6
11,777 by msellers
Mon, 2014-04-21 06:47
Normal topic undefined symbol: PyUnicodeUCS4_FromEncodedObject (from libboost_python-mt-py26.so.1.38.0)
by embl-structures » Thu, 2010-08-05 05:02
1
21,460 by embl-structures
Mon, 2014-04-21 06:47
Normal topic Question Regarding Usage of Specific Rosetta Tools in PyRosetta
by jurkm » Thu, 2010-07-22 23:54
0
1,694 by jurkm
Mon, 2014-04-21 06:47
Normal topic dG(partner) and ddG(bind)
by levinthal » Sat, 2010-08-21 17:04
2
5,604 by smlewis
Mon, 2014-04-21 06:47
Normal topic small molecule docking
by sharang » Mon, 2010-08-02 14:57
0
1,882 by sharang
Mon, 2014-04-21 06:47
Normal topic Weird message whenever I try to calculate energies
by astrofunk » Fri, 2010-08-20 05:55
2
3,689 by astrofunk
Mon, 2014-04-21 06:47
Normal topic Distance constraints for amino acids pairs
by blubbi » Tue, 2010-05-18 05:39
0
1,850 by blubbi
Mon, 2014-04-21 06:47
Normal topic analysis utilities for trajectories
by cbala » Mon, 2010-06-14 02:58
0
1,793 by cbala
Mon, 2014-04-21 06:47
Normal topic Backbone didn't change in docking, why?
by SunH » Wed, 2010-06-02 10:07
6
6,392 by SunH
Mon, 2014-04-21 06:47
Normal topic dump_pdb problems
by srballard » Fri, 2010-05-28 14:04
0
2,166 by srballard
Mon, 2014-04-21 06:47
Normal topic Help on Chimera Creator/Homodomain script
by jadolfbr » Mon, 2010-06-14 21:34
1
3,252 by mark.wilson
Mon, 2014-04-21 06:47
Normal topic [Solved] Docking to a trimer
by batch2k » Wed, 2010-02-17 02:18
1
2,252 by batch2k
Mon, 2014-04-21 06:47
Normal topic Dose it support Fixed Backbone Ddg Prediction?
by ppprotein » Fri, 2010-01-29 00:54
1
2,369 by sid
Mon, 2014-04-21 06:47
Normal topic PyRosetta v1.1
by jadolfbr » Tue, 2010-02-09 08:02
0
1,620 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic building a 77 amino acid long fragment
by tevang » Fri, 2010-02-19 06:37
0
1,712 by tevang
Mon, 2014-04-21 06:47
Normal topic Decoy Clustering
by jadolfbr » Mon, 2010-02-01 22:50
5
5,965 by nawsad
Mon, 2014-04-21 06:47
Normal topic segfault in loop
by reve_etrange » Sat, 2010-02-13 21:49
1
2,254 by reve_etrange
Mon, 2014-04-21 06:47
Normal topic Gunn fragment insertion
by jadolfbr » Sun, 2010-02-28 09:39
0
1,738 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic How to tell where and what fragment or rotamer was inserted?
by charlie.strauss » Wed, 2010-01-27 10:36
0
1,729 by charlie.strauss
Mon, 2014-04-21 06:47
Normal topic [Solved]NameError
by nunesjulioc » Fri, 2010-02-05 08:26
1
2,355 by AlexI
Mon, 2014-04-21 06:47
Normal topic ImportError PyUnicodeUCS2
by nunesjulioc » Wed, 2010-02-17 07:29
0
2,936 by nunesjulioc
Mon, 2014-04-21 06:47
Normal topic Python 2.6
by AndrewBworth » Mon, 2010-02-01 18:49
2
3,207 by AlexI
Mon, 2014-04-21 06:47
Normal topic [Solved] Segmentation fault
by zgcarvalho » Thu, 2010-02-11 06:30
2
4,856 by zgcarvalho
Mon, 2014-04-21 06:47
Normal topic Architecture question
by jwillis » Thu, 2010-02-25 09:43
0
1,850 by jwillis
Mon, 2014-04-21 06:47
Normal topic [Solved] Docking in metalloprotease (Zinc problem)
by zgcarvalho » Wed, 2010-01-20 16:04
3
5,178 by reve_etrange
Mon, 2014-04-21 06:47
Normal topic Problems with building bindings.
by AndrewBworth » Thu, 2010-02-04 17:26
0
1,908 by AndrewBworth
Mon, 2014-04-21 06:47
Normal topic DockingSlideIntoContact does not work
by batch2k » Wed, 2010-02-17 05:57
0
1,681 by batch2k
Mon, 2014-04-21 06:47
Normal topic Updating Coords
by jadolfbr » Sat, 2010-01-30 10:33
0
1,965 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic PyRosetta 1.1 for Windows?
by sylvia » Tue, 2010-02-09 16:06
0
1,581 by sylvia
Mon, 2014-04-21 06:47
Normal topic set constraints
by zgcarvalho » Wed, 2010-02-24 09:42
3
3,638 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic [Solved] PyRosetta segmentation fault in Linux
by AlexI » Wed, 2010-02-03 22:59
2
4,528 by AlexI
Mon, 2014-04-21 06:47
Normal topic Disuplhide bonds
by batch2k » Tue, 2009-12-15 09:57
3
4,977 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Falling at the first hurdle
by pardave » Tue, 2010-01-05 00:53
1
2,460 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic how do I compile the python bindings for rosetta3 for python2.5 linux x86_64
by tru » Wed, 2009-11-25 11:38
1
2,353 by luki
Mon, 2014-04-21 06:47
Normal topic Are there any plans to make PyRosetta directly functional on 64-bit architecture?
by AndrewBworth » Fri, 2009-12-18 10:09
2
2,902 by sid
Mon, 2014-04-21 06:47
Normal topic PyRosetta + PyMol
by reve_etrange » Mon, 2009-11-23 16:44
3
4,674 by reve_etrange
Mon, 2014-04-21 06:47
Normal topic Movemap Question
by jadolfbr » Thu, 2010-01-07 11:02
1
2,372 by smlewis
Mon, 2014-04-21 06:47
Normal topic installing PyRosetta on Mac OSX 10.6 and Linux in VMWare
by sid » Tue, 2009-10-06 09:04
2
4,251 by reve_etrange
Mon, 2014-04-21 06:47
Normal topic Frequently Asked Questions
by sid » Fri, 2009-10-02 09:00
0
2,266 by sid
Mon, 2014-04-21 06:47
Normal topic Announcements
by sid » Fri, 2009-10-02 08:54
0
1,691 by sid
Mon, 2014-04-21 06:47
Normal topic installing PyRosetta on non-Intel-based Mac platform
by sid » Tue, 2009-10-06 09:07
1
2,283 by JeffreyGray
Mon, 2014-04-21 06:47
Normal topic Getting interface residues?
by JuliusSu » Wed, 2014-04-16 21:58
2
3,087 by JuliusSu
Thu, 2014-04-17 18:34
Normal topic Replace the rotamer of a particular residue in a pose
by AyushGoyal » Wed, 2014-04-02 23:45
1
2,324 by rmoretti
Thu, 2014-04-03 07:27
Normal topic Rotamer bin vector from chi angles of a residue in pose not found in Dunbrack rotamer library
by AyushGoyal » Mon, 2014-02-24 22:18
3
5,117 by rmoretti
Wed, 2014-02-26 09:40
Normal topic Using OStream objects in PyRosetta
by ggyimesi » Mon, 2014-02-10 03:10
3
4,614 by ggyimesi
Mon, 2014-02-17 09:52
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