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Fragments file by Run » Tue, 2013-11-26 02:40 |
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5,135 |
by rmoretti Mon, 2014-04-21 06:48 |
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Quadratic Function for Distance Constraints? by protos_heis » Mon, 2014-01-27 06:21 |
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4,485 |
by protos_heis Mon, 2014-04-21 06:48 |
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DockingHighResLegacy repacks all sidechains on first apply(), interface sidechains on subsequent apply() by msellers » Wed, 2012-02-22 22:46 |
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5,569 |
by rmoretti Thu, 2019-05-09 15:03 |
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Pose is full atom and mover expects centroid, how do I handle it the best? by hlinn » Thu, 2022-01-27 05:55 |
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2,246 |
by hlinn Tue, 2022-02-08 07:23 |
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Problem importing AlphaFold PDB by Rick Neubig » Mon, 2023-01-09 09:48 |
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2,344 |
by Rick Neubig Tue, 2023-01-10 04:11 |
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Inconsistencies in full atom energy calculations by dsim » Tue, 2014-07-29 06:02 |
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4,750 |
by dsim Mon, 2014-09-15 07:47 |
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Protein docking with PyRosetta Error! by Apiwat » Sat, 2014-01-11 23:32 |
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7,080 |
by shivarawat115 Mon, 2022-04-11 16:03 |
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pose_from_sequence with modified residue by nawsad » Wed, 2014-06-25 02:59 |
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5,244 |
by nawsad Sun, 2014-07-13 00:49 |
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Difference between GenericMonteCarloMover() and GenericSimulatedAnnealer() by ac.research » Fri, 2018-05-11 10:37 |
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4,302 |
by ac.research Fri, 2018-05-11 15:46 |
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Calculate residue-residue pairwise energies by pachecoj » Tue, 2013-07-23 04:51 |
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6,768 |
by Sergey Mon, 2014-04-21 06:48 |
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How does Rosetta select atom pairs for Lennard Jones Potential calculations? by bowang2013 » Thu, 2015-10-29 08:04 |
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5,580 |
by smlewis Tue, 2015-11-03 09:17 |
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Calling SnugDock from PyRosetta by shruthi.murali » Wed, 2020-07-29 15:10 |
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3,274 |
by antonkulaga Thu, 2021-12-23 16:07 |
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Reducing PyRosetta memory usage by ajasja » Fri, 2014-10-03 01:51 |
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5,893 |
by Sergey Fri, 2015-04-10 11:25 |
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Strange fold tree problem with classic and fast relax by jadolfbr » Mon, 2011-03-21 11:58 |
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5,305 |
by jadolfbr Mon, 2014-04-21 06:47 |
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pymover = PyMOL_Mover() hangs IPython? by cossio » Fri, 2015-04-10 07:38 |
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5,042 |
by cossio Wed, 2015-04-15 12:31 |
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Large Memory usage in Windows r10 Build by ajasja » Fri, 2014-08-22 09:09 |
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7,387 |
by ajasja Mon, 2014-09-22 09:51 |
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Post-traslational modifications by diegoms » Wed, 2023-06-21 01:22 |
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1,039 |
by diegoms Wed, 2023-08-02 01:18 |
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Error when trying to import 'get_secstruct' by quantumnumber » Thu, 2019-04-11 03:50 |
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5,187 |
by quantumnumber Fri, 2019-05-10 02:25 |
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Add new atom by eberhardt » Thu, 2013-03-14 02:01 |
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7,140 |
by eberhardt Mon, 2014-04-21 06:47 |
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hbond_sr_bb, hbond_lr_bb, fa_intra_rep energies from ScoreFunction() by gerdos » Tue, 2017-04-18 04:46 |
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4,352 |
by gerdos Fri, 2017-04-21 01:53 |
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Does Rosetta scoring function can distinguish good structure from bad one? by Victor » Sun, 2013-06-16 21:11 |
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4,731 |
by Victor Mon, 2014-04-21 06:48 |
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Go parallel by assignfit » Tue, 2011-11-29 10:47 |
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4,790 |
by smlewis Mon, 2014-04-21 06:47 |
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How to combine two chains by seanle24245 » Tue, 2016-07-19 07:54 |
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8,661 |
by seanle24245 Fri, 2016-07-22 06:53 |
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Argument error when running D120_Ligand_interface.py by piladam » Wed, 2014-07-09 10:43 |
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7,236 |
by rmoretti Mon, 2014-07-21 11:15 |
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New Python 3.7 by ac.research » Wed, 2018-08-15 07:00 |
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5,380 |
by MNP1986 Mon, 2018-12-03 04:02 |
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Altering Score/EMapVector by mmertens » Fri, 2012-01-27 09:33 |
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5,165 |
by rmoretti Mon, 2014-04-21 06:47 |
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RosettaHoles for PyRosetta - Void Detection/Scoring by ac.research » Sat, 2017-07-01 11:28 |
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5,058 |
by rmoretti Thu, 2017-07-06 12:49 |
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I don't know what's the problem when load the fragment file by john8611 » Mon, 2014-09-29 03:45 |
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6,737 |
by rmoretti Tue, 2014-09-30 13:16 |
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Score of the protein without ligand by eberhardt » Thu, 2013-03-21 07:29 |
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6,397 |
by eberhardt Mon, 2014-04-21 06:47 |
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Output different favored solutions with PackRotamersMover design by xfliu » Fri, 2012-07-13 06:23 |
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6,079 |
by smlewis Mon, 2014-04-21 06:47 |
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Decoy Clustering by jadolfbr » Mon, 2010-02-01 22:50 |
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5,964 |
by nawsad Mon, 2014-04-21 06:47 |
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Errors when movers put in a function by rfschleif » Sat, 2011-10-08 08:41 |
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5,176 |
by msellers Mon, 2014-04-21 06:47 |
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Problem about Pyrosetta installation win7 by sprinkle166 » Mon, 2017-09-04 20:15 |
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5,087 |
by sprinkle166 Fri, 2017-09-08 12:57 |
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Error in loop modeling protocol by jai_INMAS » Fri, 2013-10-18 07:08 |
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6,125 |
by jadolfbr Mon, 2014-04-21 06:48 |
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How to optimize the orientations of polar hydrogens in PyRosetta by xfliu » Sat, 2012-04-28 16:33 |
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5,946 |
by xfliu Mon, 2014-04-21 06:47 |
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Residue.set_chi() does not update internal state? by ajasja » Wed, 2014-09-24 09:19 |
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7,237 |
by rmoretti Mon, 2014-10-06 14:37 |
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Using pyrosetta to generate quaternary structure of protein by nasim.soltani58 » Thu, 2020-11-19 17:35 |
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3,394 |
by nasim.soltani58 Tue, 2020-12-08 22:45 |
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BackrubMover options by AOK » Thu, 2012-05-24 05:06 |
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5,516 |
by AOK Mon, 2014-04-21 06:47 |
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Individual residue repacking causes segmentation fault or "ERROR: seqpos >= 1 ERROR:: Exit from: src/core/conformation/Confo..." by msellers » Wed, 2012-04-04 12:27 |
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6,130 |
by smlewis Mon, 2014-04-21 06:47 |
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Help with pyRosetta python scripting for protein manipulation by pepfolder » Thu, 2012-05-31 14:01 |
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6,470 |
by pepfolder Mon, 2014-04-21 06:47 |
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How to use SAXS energy score in PyRosetta by Jie Hou » Mon, 2016-09-05 08:31 |
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5,966 |
by rmoretti Mon, 2016-11-14 13:21 |
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Alignment and RMSD by ñ » Wed, 2013-11-27 12:43 |
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10,650 |
by rmoretti Mon, 2014-04-21 06:48 |
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Score Function with Constraints by ac.research » Fri, 2017-07-28 06:41 |
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7,586 |
by ac.research Sat, 2017-12-09 02:15 |
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mutate_residue doesn't mutate by dsim » Wed, 2015-03-18 02:32 |
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7,652 |
by rmoretti Fri, 2016-04-29 09:48 |
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∆G calculation script for protein and mutation of AA at each residue by ara » Tue, 2011-10-25 13:57 |
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8,400 |
by ara Mon, 2014-04-21 06:47 |
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Creating rotamers, computing pairwise and total energies by gerdos » Wed, 2017-04-12 02:57 |
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5,935 |
by gerdos Tue, 2017-04-18 10:15 |
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Fold tree not correct for multi-chain partners by msellers » Fri, 2010-12-10 05:35 |
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7,081 |
by msellers Mon, 2014-04-21 06:47 |
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Pyrosetta energy function by somayyehzangooei » Mon, 2011-05-09 08:20 |
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8,199 |
by smlewis Mon, 2014-04-21 06:47 |
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Parallel processing? by mark.wilson » Mon, 2010-07-26 15:12 |
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11,773 |
by msellers Mon, 2014-04-21 06:47 |
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Backbone didn't change in docking, why? by SunH » Wed, 2010-06-02 10:07 |
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6,390 |
by SunH Mon, 2014-04-21 06:47 |
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Error getting MinMover attributes by assaff » Sun, 2012-03-25 10:54 |
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6,233 |
by smlewis Mon, 2014-04-21 06:47 |
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PyRosetta surface docking not working by cgautier » Mon, 2015-03-16 05:45 |
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8,144 |
by Sergey Wed, 2015-03-18 11:22 |
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Segmentation fault when reading VMD PDB by msellers » Mon, 2011-01-03 07:14 |
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9,250 |
by smlewis Mon, 2014-04-21 06:47 |
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Initializing DockDesignParser in PyRosetta by LiorZ » Mon, 2013-04-22 01:56 |
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6,568 |
by LiorZ Mon, 2014-04-21 06:47 |
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Muting output in pyrosetta by SenyorDrew » Mon, 2017-08-14 08:13 |
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6,952 |
by SenyorDrew Tue, 2017-08-15 07:41 |
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(1) Score pose, (2) move atom, (3) score pose by msellers » Fri, 2011-07-15 11:04 |
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6,222 |
by msellers Mon, 2014-04-21 06:47 |
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option removal/KIC by jadolfbr » Thu, 2012-02-02 16:35 |
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5,843 |
by jadolfbr Mon, 2014-04-21 06:47 |
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Unpredictible amino acid replacements by Victor » Wed, 2012-05-09 09:21 |
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6,147 |
by aloctavodia Mon, 2014-04-21 06:47 |
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PyMOL Update by ac.research » Tue, 2018-04-10 22:07 |
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5,213 |
by Sergey Tue, 2018-05-15 11:20 |
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Fold Tutorial by ac.research » Sat, 2017-06-03 19:39 |
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8,777 |
by smlewis Sat, 2017-06-10 15:15 |
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Creating FeatureReporters in PyRosetta by LiorZ » Tue, 2016-08-23 23:50 |
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6,529 |
by smlewis Wed, 2016-08-24 14:23 |
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Rotamer information from pose by AyushGoyal » Wed, 2014-01-15 14:37 |
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9,282 |
by rmoretti Mon, 2014-04-21 06:48 |
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Customize Rosetta codes and make it accessible to PyRosetta by xfliu » Thu, 2012-05-24 06:27 |
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6,542 |
by Sergey Mon, 2014-04-21 06:47 |
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Error while converting mol2 to params using molfile_to_params.py by ahmadkhalifa » Thu, 2018-06-14 10:30 |
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7,379 |
by rmoretti Thu, 2018-06-28 12:04 |
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Question about gradient of energy function by kyler » Tue, 2017-08-22 14:09 |
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7,350 |
by rmoretti Tue, 2017-09-05 10:05 |
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How can I automate mutations with PyRosetta or other Rosetta software? by archaeopteryx » Mon, 2023-07-03 19:35 |
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1,603 |
by arjan-hada Sat, 2024-01-27 05:48 |
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Energy scores of D-amino acids by jshen2 » Mon, 2017-05-08 10:15 |
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6,134 |
by jshen2 Sat, 2017-05-13 08:14 |
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How to calculate the pairwise rotamer-to-rotamer energy table between mutable residues allowed to change to all amino acid types by AyushGoyal » Wed, 2014-01-22 16:24 |
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9,111 |
by rmoretti Mon, 2014-04-21 06:48 |
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Fix corrupted Backbone by ac.research » Mon, 2018-03-05 12:48 |
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6,237 |
by ac.research Tue, 2018-03-13 21:36 |
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PyRosetta AbInitio Folding protocol by batch2k » Tue, 2009-12-15 11:09 |
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12,333 |
by jadolfbr Thu, 2015-02-05 10:32 |
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mutate_residue not working by lanselibai » Mon, 2014-08-11 03:55 |
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8,729 |
by lanselibai Sun, 2014-08-17 07:30 |
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backrub mover by sunlufinal » Sat, 2012-11-24 04:46 |
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11,482 |
by jadolfbr Tue, 2015-08-18 00:53 |
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Relaxing experimental structure by aloctavodia » Thu, 2016-09-29 03:46 |
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8,420 |
by aloctavodia Thu, 2016-10-06 03:29 |
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Rotamer Libraries in Pyrosetta by protos_heis » Fri, 2013-01-18 12:02 |
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10,803 |
by jadolfbr Mon, 2014-04-21 06:47 |
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Executing the mc simulation of polyalanine fragment by bharat_46010 » Mon, 2011-01-17 19:18 |
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8,327 |
by smlewis Mon, 2014-04-21 06:47 |
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Error when importing protocols.simple_filters by xfliu » Tue, 2012-10-16 13:37 |
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7,601 |
by xfliu Mon, 2014-04-21 06:47 |
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How to set up external C++ folding server by seanle24245 » Sat, 2016-06-11 10:54 |
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8,279 |
by seanle24245 Sun, 2016-06-19 18:30 |
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Concatenate Pose by jadolfbr » Sat, 2011-02-19 21:12 |
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9,308 |
by smlewis Mon, 2014-04-21 06:47 |
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Symmetric design with PyRosetta by dsim » Thu, 2016-11-17 07:50 |
9 |
8,748 |
by dsim Tue, 2016-11-22 08:11 |
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problems with low-resolution loop refinemet (LoopMover_Perturb_CCD) by aloctavodia » Thu, 2012-07-26 06:51 |
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8,766 |
by jadolfbr Mon, 2014-04-21 06:47 |
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Fragment Quality by ac.research » Mon, 2017-07-10 10:23 |
9 |
7,618 |
by ac.research Fri, 2017-07-14 12:55 |
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The Beta version of PyRosetta 2.0 is ready for download! by Sergey » Mon, 2011-01-24 10:12 |
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8,554 |
by drluca77 Mon, 2014-04-21 06:47 |
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PyRosetta FastDesign by ac.research » Tue, 2017-07-04 10:23 |
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10,377 |
by ac.research Wed, 2017-07-05 16:59 |
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Fragment Picking in PyRosetta by ac.research » Thu, 2017-08-31 04:48 |
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10,158 |
by rmoretti Tue, 2017-10-10 09:16 |
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cartesian space minimization by bystrc » Fri, 2014-03-28 14:17 |
10 |
15,052 |
by rmoretti Thu, 2016-02-18 14:22 |
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Send the output of PyRosetta to a PyMOLPyRosettaServer on a remote computer? by lah435 » Mon, 2012-09-10 16:06 |
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10,707 |
by ggyimesi Mon, 2014-04-21 06:47 |
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newbie question re pose syntax by Amy F » Mon, 2019-04-15 12:50 |
10 |
8,932 |
by jadolfbr Wed, 2019-04-24 10:12 |
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adding coordinate constraints by jtmacd » Tue, 2011-04-12 04:51 |
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12,177 |
by jtmacd Mon, 2014-04-21 06:47 |
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non canonical aa mutations/force fields/pyrosetta by Anouk » Wed, 2013-06-19 01:51 |
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13,494 |
by jadolfbr Mon, 2014-04-21 06:48 |
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how to read a silent file ? by Anonymous » Wed, 2012-06-27 09:34 |
12 |
11,965 |
by Anonymous Mon, 2014-04-21 06:47 |
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ΔΔG Calculation of a Mutation with PyRosetta by akaashvenkat » Fri, 2018-03-09 01:44 |
13 |
13,921 |
by matteoferla Wed, 2022-01-12 01:20 |
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how can we calculate Rosetta score on some decoy set? by mirzaie » Wed, 2013-06-19 08:43 |
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14,317 |
by jadolfbr Mon, 2014-04-21 06:48 |
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An issue with GenericMonteCarloMover() by ac.research » Wed, 2018-03-07 13:57 |
13 |
9,504 |
by ac.research Fri, 2018-05-11 10:59 |
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Minimization question by rfschleif » Wed, 2011-05-25 06:59 |
14 |
13,374 |
by Sergey Mon, 2014-04-21 06:47 |
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HBondEnergy by bharat_46010 » Wed, 2013-05-15 19:03 |
15 |
17,416 |
by rmoretti Mon, 2014-04-21 06:47 |
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SequenceRelax on a loop by jtmacd » Mon, 2011-04-11 07:53 |
15 |
13,726 |
by ñ Mon, 2014-04-21 06:47 |
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Making mutations in PyRosetta? by thorx020 » Thu, 2012-08-09 09:24 |
15 |
21,388 |
by ajasja Mon, 2014-09-22 10:17 |
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Creating a vector1 of AtomID objects by msellers » Mon, 2011-07-18 06:24 |
19 |
17,470 |
by msellers Mon, 2014-04-21 06:47 |
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Score Function weights by thorx020 » Sun, 2012-08-12 13:59 |
24 |
38,287 |
by msun Fri, 2015-07-10 11:03 |
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Energy Minimization by bharat_46010 » Wed, 2013-07-31 20:45 |
24 |
31,280 |
by rmoretti Mon, 2014-04-21 06:48 |
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