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PyRosetta - General

Topic / Topic startersort descending Replies Views Last post
Normal topic rmsd and Lrmsd in loop modeling
by Victor » Tue, 2012-01-24 09:52
3
3,223 by Victor
Mon, 2014-04-21 06:47
Normal topic RNA docking
by eschulz » Tue, 2012-02-28 03:04
1
3,408 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta Docking server
by hourosetta » Fri, 2011-02-11 08:36
1
2,634 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta get_fa_scorefxn()
by israeldesta » Thu, 2019-10-31 10:18
3
1,672 by jadolfbr
Thu, 2019-11-14 15:33
Normal topic Rosetta score vs Experiment
by thorx020 » Tue, 2012-09-04 12:38
3
5,107 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta.core.pack.pack_rotamers_setup(pose, score_fxn, task_design, rotsets) not working
by tschiex » Sun, 2017-11-05 08:29
0
790 by tschiex
Sun, 2017-11-05 08:29
Normal topic RosettaDesign Result Evaluation
by ac.research » Tue, 2018-06-05 18:45
2
1,373 by ac.research
Wed, 2018-07-18 03:50
Normal topic RosettaHoles for PyRosetta - Void Detection/Scoring
by ac.research » Sat, 2017-07-01 11:28
5
2,655 by rmoretti
Thu, 2017-07-06 12:49
Normal topic RosettaModel blueprint for PyRosetta
by bbrown11 » Tue, 2015-03-03 13:53
3
2,435 by matteoferla
Thu, 2021-04-29 06:30
Normal topic Rotamer bin vector from chi angles of a residue in pose not found in Dunbrack rotamer library
by AyushGoyal » Mon, 2014-02-24 22:18
3
3,680 by rmoretti
Wed, 2014-02-26 09:40
Normal topic Rotamer information from pose
by AyushGoyal » Wed, 2014-01-15 14:37
7
6,565 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Rotamer Libraries in Pyrosetta
by protos_heis » Fri, 2013-01-18 12:02
8
7,449 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic RuntimeError: unidentifiable C++ exception in both linux and window.
by wajidarshad » Tue, 2015-10-27 08:16
1
2,293 by rmoretti
Tue, 2015-10-27 08:46
Normal topic Sample dihedral database
by tiagogomes89 » Mon, 2018-03-12 04:28
2
1,213 by tiagogomes89
Mon, 2018-03-12 10:01
Normal topic SASA of pose
by ac.research » Mon, 2017-06-26 03:55
2
1,826 by ac.research
Fri, 2017-06-30 05:44
Normal topic Score bonus to hbond
by yijietseng » Fri, 2019-07-05 12:28
1
628 by rmoretti
Tue, 2019-07-09 09:42
Hot topic Score Function weights
by thorx020 » Sun, 2012-08-12 13:59
24
28,761 by msun
Fri, 2015-07-10 11:03
Normal topic Score Function with Constraints
by ac.research » Fri, 2017-07-28 06:41
6
4,233 by ac.research
Sat, 2017-12-09 02:15
Normal topic Score of the protein without ligand
by eberhardt » Thu, 2013-03-21 07:29
5
4,461 by eberhardt
Mon, 2014-04-21 06:47
Normal topic Score2 and Score5...aren't hey meant to be different?
by oppopomoz » Wed, 2013-02-20 03:31
2
2,944 by smlewis
Mon, 2014-04-21 06:47
Normal topic Scoring after switching back to fullatom
by thorx020 » Thu, 2013-10-03 08:06
1
1,563 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Scoring with CCP4 electron density maps constraints
by xfliu » Thu, 2012-05-03 03:30
0
1,624 by xfliu
Mon, 2014-04-21 06:47
Normal topic Script running, but returns no results
by chinhsutran » Fri, 2013-11-22 06:25
1
1,569 by rmoretti
Mon, 2014-04-21 06:48
Normal topic segfault in loop
by reve_etrange » Sat, 2010-02-13 21:49
1
1,433 by reve_etrange
Mon, 2014-04-21 06:47
Normal topic Segfault when loading scorefxn() and load_from_pdb()
by mm » Wed, 2020-07-22 03:00
0
247 by mm
Wed, 2020-07-22 03:02
Normal topic Segmentation fault when reading VMD PDB
by msellers » Mon, 2011-01-03 07:14
6
6,846 by smlewis
Mon, 2014-04-21 06:47
Normal topic Send the output of PyRosetta to a PyMOLPyRosettaServer on a remote computer?
by lah435 » Mon, 2012-09-10 16:06
10
7,208 by ggyimesi
Mon, 2014-04-21 06:47
Hot topic SequenceRelax on a loop
by jtmacd » Mon, 2011-04-11 07:53
15
8,625 by ñ
Mon, 2014-04-21 06:47
Normal topic set constraints
by zgcarvalho » Wed, 2010-02-24 09:42
3
2,253 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic set_torsion_angle error
by yijietseng » Tue, 2019-07-09 12:43
2
829 by yijietseng
Wed, 2019-07-10 09:28
Normal topic Simple mover that holds lowest energy pose
by jadolfbr » Fri, 2013-03-15 13:23
3
2,501 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic small molecule docking
by sharang » Mon, 2010-08-02 14:57
0
1,358 by sharang
Mon, 2014-04-21 06:47
Normal topic Specifying disulfide bonds
by msellers » Thu, 2010-12-02 10:38
1
2,977 by msellers
Mon, 2014-04-21 06:47
Normal topic Strange fold tree problem with classic and fast relax
by jadolfbr » Mon, 2011-03-21 11:58
4
3,668 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Structure not changing after pose.set_phi
by publicclass » Thu, 2020-11-05 09:34
0
206 by publicclass
Thu, 2020-11-05 09:34
Normal topic Suggestion: setting Sphinx documentation to not skip __init__
by matteoferla » Mon, 2020-08-24 09:02
0
375 by matteoferla
Mon, 2020-08-24 09:02
Normal topic Symmetric design with PyRosetta
by dsim » Thu, 2016-11-17 07:50
9
5,201 by dsim
Tue, 2016-11-22 08:11
Normal topic Symmetric pose initialization fails
by gudmal » Tue, 2013-11-26 06:42
3
2,707 by Sergey
Mon, 2014-04-21 06:48
Normal topic task_pack.restrict_to_repacking() not working
by lanselibai » Mon, 2014-08-11 08:06
1
1,467 by rmoretti
Tue, 2014-08-12 08:35
Normal topic The Beta version of PyRosetta 2.0 is ready for download!
by Sergey » Mon, 2011-01-24 10:12
9
5,424 by drluca77
Mon, 2014-04-21 06:47
Normal topic trRosetta modelling with a ligand
by ShiranBZ » Tue, 2020-08-25 01:44
0
441 by ShiranBZ
Tue, 2020-08-25 01:44
Normal topic Trying to call pack_rotamers_setup()
by pachecoj » Tue, 2013-07-23 16:07
2
2,467 by Sergey
Mon, 2014-04-21 06:48
Normal topic undefined symbol: PyUnicodeUCS4_FromEncodedObject (from libboost_python-mt-py26.so.1.38.0)
by embl-structures » Thu, 2010-08-05 05:02
1
19,009 by embl-structures
Mon, 2014-04-21 06:47
Normal topic Units of kT for MC mover
by msellers » Fri, 2010-12-10 05:40
1
2,787 by smlewis
Mon, 2014-04-21 06:47
Normal topic Unpredictible amino acid replacements
by Victor » Wed, 2012-05-09 09:21
6
3,933 by aloctavodia
Mon, 2014-04-21 06:47
Normal topic Updating Coords
by jadolfbr » Sat, 2010-01-30 10:33
0
1,312 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Username and Password for download link?
by juden99 » Thu, 2011-02-17 03:30
3
2,586 by juden99
Mon, 2014-04-21 06:47
Normal topic Using a custom scoring method in a high resolution refinement
by kalabharath » Sun, 2015-10-25 22:28
1
1,861 by rmoretti
Mon, 2015-10-26 13:57
Normal topic Using InterfaceSasaFilter
by SenyorDrew » Thu, 2017-10-26 07:53
2
1,638 by SenyorDrew
Thu, 2017-10-26 13:30
Normal topic Using OStream objects in PyRosetta
by ggyimesi » Mon, 2014-02-10 03:10
3
3,028 by ggyimesi
Mon, 2014-02-17 09:52
Normal topic Using pose.set_xyz() to move chains causes increase in only pro_close energy
by msellers » Mon, 2011-07-25 06:57
3
3,041 by msellers
Mon, 2014-04-21 06:47
Normal topic Using pyrosetta to generate quaternary structure of protein
by nasim.soltani58 » Thu, 2020-11-19 17:35
5
579 by nasim.soltani58
Tue, 2020-12-08 22:45
Normal topic Using ref2015 and talaris2014 in the same script
by SenyorDrew » Wed, 2017-11-01 10:24
2
2,456 by SenyorDrew
Wed, 2017-11-01 10:39
Normal topic Viewing and modifying hydrogen bond detection criteria
by promero » Tue, 2014-09-16 15:26
1
1,952 by rmoretti
Wed, 2014-09-17 07:29
Normal topic Weird message whenever I try to calculate energies
by astrofunk » Fri, 2010-08-20 05:55
2
2,646 by astrofunk
Mon, 2014-04-21 06:47
Normal topic Where can I found the dictory of all function of Pyrosetta?
by sprinkle166 » Mon, 2017-10-16 13:58
2
1,451 by sprinkle166
Wed, 2017-10-18 09:06
Normal topic Which function can be use for mutation?
by sprinkle166 » Wed, 2017-10-18 09:10
2
1,656 by sprinkle166
Thu, 2017-10-19 12:57
Normal topic Which score4?
by oppopomoz » Tue, 2013-03-12 06:21
4
4,645 by smlewis
Mon, 2014-04-21 06:47
Normal topic why two packing setting return different energy?
by zhangying1990 » Wed, 2019-01-30 00:18
2
1,106 by zhangying1990
Fri, 2019-02-01 00:30
Normal topic Windows Dunbrack10.lib.bin "out dated"
by protos_heis » Thu, 2015-02-26 13:35
2
2,227 by protos_heis
Fri, 2015-02-27 13:38
Normal topic Windows native build of PyRosetta 2.011 is ready for download!
by Sergey » Mon, 2011-11-21 18:25
1
1,856 by Sergey
Mon, 2014-04-21 06:47
Normal topic Windows version of PyRosetta 2.0 is ready for download!
by Sergey » Fri, 2011-02-11 15:58
0
1,306 by Sergey
Mon, 2014-04-21 06:47
Normal topic WindowsError: [Error 32]
by jetu20 » Sun, 2020-10-11 21:02
0
248 by jetu20
Sun, 2020-10-11 21:02
Normal topic Writing out individual residues to a pdbfile
by SenyorDrew » Thu, 2016-12-08 07:33
3
2,422 by SenyorDrew
Thu, 2016-12-08 13:10
Normal topic [Solved] Docking in metalloprotease (Zinc problem)
by zgcarvalho » Wed, 2010-01-20 16:04
3
3,680 by reve_etrange
Mon, 2014-04-21 06:47
Normal topic [Solved] Docking to a trimer
by batch2k » Wed, 2010-02-17 02:18
1
1,426 by batch2k
Mon, 2014-04-21 06:47
Normal topic [Solved] PyRosetta segmentation fault in Linux
by AlexI » Wed, 2010-02-03 22:59
2
3,137 by AlexI
Mon, 2014-04-21 06:47
Normal topic [Solved] Segmentation fault
by zgcarvalho » Thu, 2010-02-11 06:30
2
3,571 by zgcarvalho
Mon, 2014-04-21 06:47
Normal topic [Solved]NameError
by nunesjulioc » Fri, 2010-02-05 08:26
1
1,491 by AlexI
Mon, 2014-04-21 06:47
Normal topic ΔG Calculation with PyRosetta
by Sandra » Tue, 2019-05-21 00:26
1
720 by rmoretti
Mon, 2019-06-24 12:47
Normal topic ΔΔG Calculation of a Mutation with PyRosetta
by akaashvenkat » Fri, 2018-03-09 01:44
7
4,735 by Sazhnyev
Tue, 2018-03-13 15:55
Normal topic ∆G calculation script for protein and mutation of AA at each residue
by ara » Tue, 2011-10-25 13:57
6
5,790 by ara
Mon, 2014-04-21 06:47
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