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Sticky topic Sticky: FAQ
by admin » Mon, 2010-08-30 04:18
0
17,017 by admin
Fri, 2015-09-04 16:17
Normal topic Error with SapScoreMetric (SimpleMetric sap_score not found in basic::datacache::DataMap)
by Seongsung » Fri, 2023-11-24 05:09
0
32 by Seongsung
Fri, 2023-11-24 13:14
Normal topic I want to refine my pdb file,but it has multiple breaks or has multiple loops missing resi
by Edward » Sat, 2023-11-25 04:58
1
45 by Edward
Sat, 2023-11-25 05:17
Normal topic analyze_flex_ddG.py
by valebut » Tue, 2023-11-28 04:30
1
55 by Aleksandra Panfilova
Tue, 2023-11-28 05:34
Normal topic 'Use_filters true' option - failure of AbInitio Relax application
by Corvin » Wed, 2023-11-08 06:34
0
61 by Corvin
Wed, 2023-11-08 06:34
Normal topic Error with docking_prepack_protocol while executing the tutorial "Docking Flexible Proteins"
by vitoralmeida1808 » Mon, 2023-11-06 09:43
0
64 by vitoralmeida1808
Mon, 2023-11-06 09:43
Normal topic nomenclature question in molfile_to_params_polymer.py in ncaa design
by lei » Tue, 2023-11-21 09:47
2
81 by lei
Wed, 2023-11-22 06:23
Normal topic Match: Outputs with 0 hits for cst and clashes with sidechains
by uka147 » Wed, 2023-11-08 06:11
0
96 by uka147
Thu, 2023-11-09 01:36
Normal topic Is Biopython required to run pdb_renumber.py?
by ljjjxay » Wed, 2023-11-22 20:00
5
104 by rmoretti
Mon, 2023-11-27 07:26
Normal topic Antibody Structure Prediction - Error on antibody_H3 step: "Option matching -antibody:remodel not found in command line"
by ramon-arg » Mon, 2023-07-24 17:56
0
170 by ramon-arg
Mon, 2023-07-24 17:56
Normal topic How do I compare the results of InterfaceAnalyzer using different trimers as input?
by franz72 » Sun, 2023-08-06 10:10
0
184 by franz72
Sun, 2023-08-06 10:10
Normal topic Memory Leak in FragmentPicker.cxx11thread application
by Corvin » Tue, 2023-07-11 06:04
0
190 by Corvin
Thu, 2023-07-13 05:30
Normal topic Generating a new Vall database
by vijay.anand » Tue, 2023-06-20 12:08
0
226 by vijay.anand
Tue, 2023-06-20 12:08
Normal topic ERROR: ResidueType::add_ring: Requested atoms don't exist in this ResidueType!
by walidabualafia » Thu, 2023-07-20 09:44
1
227 by rmoretti
Thu, 2023-07-20 10:08
Normal topic Silent File Scores Missing: RNA Protein Complex Predition
by axio23 » Fri, 2023-06-16 05:45
0
237 by axio23
Fri, 2023-06-16 05:45
Normal topic FixedBB design output no beta strands
by tkoh » Fri, 2023-08-25 01:02
1
241 by rmoretti
Tue, 2023-08-29 20:13
Normal topic non-zero ddG of binding even without mutations
by top-gun98 » Wed, 2023-06-07 17:19
0
247 by top-gun98
Wed, 2023-06-07 17:19
Normal topic RECCESS-Rosetta Segmentation Fault with nonnatural residues
by skorro » Tue, 2023-07-25 17:13
1
270 by skorro
Fri, 2023-07-28 12:20
Normal topic Dock cyclic peptide with non-canonical amino acids to protein target using rosetta flexpepdock?
by lei » Mon, 2023-09-11 23:34
2
275 by lei
Wed, 2023-09-13 19:35
Normal topic error in loop remodeling
by syntekabio2019 » Wed, 2023-04-05 01:00
0
281 by syntekabio2019
Wed, 2023-04-05 01:01
Normal topic PyIgClassify cannot renumber and label CDRs my Nanobody-Antigen complex for RabD
by WBNeT » Fri, 2023-07-07 10:58
1
281 by jadolfbr
Mon, 2023-07-10 09:05
Normal topic Are catalytic residues mutatable?
by uka147 » Thu, 2023-10-26 03:49
3
296 by uka147
Mon, 2023-10-30 01:53
Normal topic ValueError("Path %s does not exist!" % path_name) for rna_helix.py
by kameisel » Wed, 2023-08-16 00:39
2
296 by kameisel
Wed, 2023-09-13 02:16
Normal topic Simple_cycpep_predict with crosslinker BBMB
by Ken » Tue, 2023-05-09 08:52
0
301 by Ken
Tue, 2023-05-09 08:52
Normal topic rosetta_cm - ERROR: Assertion `tlen < slen` failed on File: src/core/fragment/util.cc:177
by ramon-arg » Thu, 2023-07-13 18:41
2
308 by ramon-arg
Fri, 2023-07-14 07:47
Normal topic Rosetta Design: Non-canonical amino acid substrate not accepted
by Friedrich Ehinger » Fri, 2023-08-04 00:09
2
325 by Friedrich Ehinger
Fri, 2023-08-04 08:38
Normal topic Missing atoms, unable to fill in missing atoms
by kwu030 » Fri, 2023-05-05 13:41
1
328 by rmoretti
Fri, 2023-05-05 13:44
Normal topic Cannot install DAlphaBall
by gerdos » Fri, 2023-10-13 07:55
1
339 by Seongsung
Fri, 2023-11-24 04:52
Normal topic dG_separated values comparison
by almeida85 » Mon, 2023-04-24 03:34
0
359 by almeida85
Tue, 2023-05-16 01:02
Normal topic cluster docked pdbs
by kwu030 » Wed, 2023-06-14 22:48
1
382 by rmoretti
Wed, 2023-06-28 12:36
Normal topic Error with xml script
by almeida85 » Tue, 2023-03-28 01:53
0
405 by almeida85
Tue, 2023-05-16 01:00
Normal topic CC (or similar) calculation for cryoEM fitting
by almeida85 » Tue, 2023-05-16 01:32
2
443 by almeida85
Tue, 2023-05-23 08:23
Normal topic fragment_picker:[ ERROR ] UtilityExitException ERROR: can't open file: $ROSETTA/tools/fragment_tools/vall.jul19.2011.gz
by yueyuedake » Wed, 2023-07-12 03:36
6
536 by yueyuedake
Sun, 2023-07-16 19:17
Normal topic Docking one protein into interface between two other proteins
by Cheems » Sat, 2023-05-06 09:49
3
555 by rmoretti
Mon, 2023-05-08 13:14
Normal topic Repacker vs minimization
by Elijah_Hix » Fri, 2021-07-02 07:25
0
587 by Elijah_Hix
Fri, 2021-07-02 07:25
Normal topic FlexPepDock ab initio: behavior without fragment files
by nrollins » Mon, 2021-07-26 14:16
0
604 by nrollins
Mon, 2021-07-26 14:16
Normal topic Segfault with Pepspec
by almeida85 » Thu, 2021-02-11 02:56
0
614 by almeida85
Thu, 2021-02-11 02:56
Normal topic Rosetta DARc suboptimal dockings
by ddhoyo » Mon, 2021-10-11 06:18
0
620 by ddhoyo
Mon, 2021-10-11 06:18
Normal topic Protein Protein Docking with Linker
by mrinal » Mon, 2023-03-20 15:58
0
623 by mrinal
Mon, 2023-03-20 15:58
Normal topic pMHC modelling
by Roberto » Thu, 2022-08-04 07:11
0
626 by Roberto
Thu, 2022-08-04 07:11
Normal topic Writing down properties for new atom types
by Corvin » Tue, 2021-01-12 04:30
0
642 by Corvin
Wed, 2021-01-13 04:00
Normal topic Trehalose
by jpfuenzalidawx » Thu, 2022-09-08 00:49
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647 by jpfuenzalidawx
Thu, 2022-09-08 00:49
Normal topic Per residue total score
by johnnytam100 » Wed, 2022-07-13 21:57
0
649 by johnnytam100
Wed, 2022-07-13 21:57
Normal topic What is an SS0 predictor?
by ojmel » Fri, 2021-04-02 14:25
0
652 by ojmel
Mon, 2021-04-12 07:50
Normal topic metalloprotein ab initio with glutamic acid
by inorgchem » Tue, 2020-06-16 20:45
0
652 by inorgchem
Tue, 2020-06-16 20:45
Normal topic FlexPepDock bug? Constraints do not appear in total_score?
by nrollins » Mon, 2021-07-26 14:29
0
654 by nrollins
Mon, 2021-07-26 14:29
Normal topic Error with RNA_denovo
by zmfowler » Thu, 2022-07-14 05:34
0
655 by zmfowler
Thu, 2022-07-14 05:34
Normal topic problem in using "zinc_site_redesign" tool
by Isomerase » Mon, 2022-03-28 01:19
0
660 by Isomerase
Mon, 2022-03-28 01:19
Normal topic Patch to impose tetrahedral geometry on backbone O atom
by georg » Thu, 2021-04-08 09:30
0
674 by georg
Thu, 2021-04-08 09:31
Normal topic CS-Rosetta cofactor
by martongadanecz » Wed, 2022-08-03 01:05
0
676 by martongadanecz
Wed, 2022-08-03 01:05
Normal topic Bug Report - Encoding issue
by daniloboskovic » Tue, 2020-08-04 07:02
0
679 by daniloboskovic
Tue, 2020-08-04 07:02
Normal topic flexpepdcok of lipid conjugated peptide with glyco protein.
by ravi.thakkkar369 » Fri, 2020-12-18 13:00
0
679 by ravi.thakkkar369
Fri, 2020-12-18 13:00
Normal topic Symmetry definition file versions
by Jeff Qu » Tue, 2021-09-28 09:53
0
681 by Jeff Qu
Tue, 2021-09-28 09:53
Normal topic Pepspec - sequence sampling
by almeida85 » Thu, 2022-06-23 04:05
0
682 by almeida85
Thu, 2022-06-23 05:50
Normal topic clashes created with enzdes
by listofdina » Mon, 2021-08-02 06:51
0
686 by listofdina
Mon, 2021-08-02 06:51
Normal topic Prepacking a macrocycle for docking / preserving cyclization
by almeida85 » Thu, 2022-09-08 06:54
0
690 by almeida85
Thu, 2022-09-08 06:54
Normal topic PDB Clustering
by code_Monkey » Mon, 2021-04-05 10:40
0
690 by code_Monkey
Mon, 2021-04-05 10:40
Normal topic Ab Initio folding with HEM ligand molecule
by jseco » Fri, 2021-03-05 06:49
0
696 by jseco
Mon, 2021-03-08 03:40
Normal topic Issues with modifying dock.xml for multiple ligand docking
by DGR95 » Fri, 2021-05-14 12:51
0
697 by DGR95
Fri, 2021-05-14 12:51
Normal topic clustering output file has few structures
by fabiotrovato » Mon, 2020-08-17 11:37
0
697 by fabiotrovato
Mon, 2020-08-17 11:37
Normal topic Linker Building in scFv
by sam_dc » Sat, 2021-10-09 05:38
0
704 by sam_dc
Sat, 2021-10-09 05:38
Normal topic Include MHC alpha helices in loop modelling protocol for pMHC complex
by Roberto » Thu, 2022-08-04 07:22
0
705 by Roberto
Thu, 2022-08-04 07:22
Normal topic FastRelax Refinement severe clashes
by Victor Tobiasson » Thu, 2021-05-20 06:55
0
705 by Victor Tobiasson
Thu, 2021-05-20 06:55
Normal topic multi ligand docking using rosetta script
by syntekabio2019 » Tue, 2021-04-13 19:31
0
712 by syntekabio2019
Tue, 2021-04-13 19:31
Normal topic simple_cycpep_predict thioether_lariat option
by Ken » Mon, 2022-03-14 15:14
0
716 by Ken
Mon, 2022-03-14 15:14
Normal topic Question with rosetta AbPredict tutorial
by terabithia2011 » Mon, 2021-01-25 09:24
0
725 by terabithia2011
Mon, 2021-01-25 09:24
Normal topic General question regarding ligand-docking
by Alison_Yajie » Thu, 2020-05-07 09:48
0
731 by Alison_Yajie
Thu, 2020-05-07 09:48
Normal topic Side-chain grafting at the fixed protein and position
by Kazu » Wed, 2020-05-20 08:49
0
735 by Kazu
Wed, 2020-05-20 08:49
Normal topic Fewer than expected structures in clustering output
by fabiotrovato » Thu, 2020-08-20 00:59
0
736 by fabiotrovato
Thu, 2020-08-20 00:59
Normal topic Urgent issue: Error with submitting a new Rosetta-Vienna RNP-ddG job
by eyaaaan » Sun, 2022-08-07 22:03
0
741 by eyaaaan
Tue, 2022-08-09 21:59
Normal topic constraining different chains together in rosetta_cm
by y_atsmonraz » Thu, 2021-11-18 02:59
0
742 by y_atsmonraz
Thu, 2021-11-18 03:01
Normal topic Docking HeparinSulfate to proteins using GlycanDock
by GebauerJ » Tue, 2022-08-16 07:44
0
747 by GebauerJ
Tue, 2022-08-16 07:44
Normal topic zero standard deviation of I_sc in protein-protein docking
by rohi » Fri, 2020-07-03 22:19
0
753 by rohi
Fri, 2020-07-03 22:20
Normal topic SecundaryStructure Filter
by Soler » Sun, 2021-11-21 22:20
0
757 by Soler
Sun, 2021-11-21 22:20
Normal topic How many iterations of remodel is enough?
by daniloboskovic » Thu, 2020-07-16 08:07
0
757 by daniloboskovic
Thu, 2020-07-16 08:14
Normal topic Pepspec Anchor Dock
by Soler » Wed, 2020-09-16 19:08
0
758 by Soler
Wed, 2020-09-16 19:08
Normal topic appropriate sampling for protein docking to a multi chain assembly
by SWM » Fri, 2020-01-24 11:22
0
764 by SWM
Fri, 2020-01-24 11:22
Normal topic Ligand Docking with ROSETTA
by sc19 » Thu, 2022-07-14 01:32
0
764 by sc19
Thu, 2022-07-14 01:34
Normal topic Dimeric interface redesign
by kjs1728 » Mon, 2022-05-02 21:57
0
764 by kjs1728
Mon, 2022-05-02 21:57
Normal topic Params for a stapled helix peptide
by e3lm » Thu, 2022-05-26 12:55
0
764 by e3lm
Thu, 2022-05-26 12:55
Normal topic Creating fragment files for proteins less than 27 aa in length
by Poladu » Tue, 2021-01-26 07:50
0
768 by Poladu
Tue, 2021-01-26 07:50
Normal topic Enzyme Design Not Editing Structure
by liuwenxi » Wed, 2022-05-18 10:12
0
770 by liuwenxi
Wed, 2022-05-18 10:12
Normal topic Modelling humanized camelid like antibody
by terabithia2011 » Tue, 2021-01-26 10:12
0
771 by terabithia2011
Tue, 2021-01-26 10:12
Normal topic Ligand docking with constraint
by Alison_Yajie » Wed, 2020-06-24 12:34
0
771 by Alison_Yajie
Wed, 2020-06-24 12:34
Normal topic Benchmarking Rosetta DDG Methods
by sareeves96 » Fri, 2022-07-29 09:55
0
771 by sareeves96
Fri, 2022-07-29 09:55
Normal topic Macrocycle from a C-terminal amidated peptide
by almeida85 » Thu, 2022-08-18 07:53
0
774 by almeida85
Thu, 2022-08-18 07:53
Normal topic Scoring after HBNet
by HHL_SIUC » Wed, 2020-07-01 10:49
0
774 by HHL_SIUC
Wed, 2020-07-01 10:49
Normal topic RosettaAntibody3 - How can I model an extended H3?
by brspurri » Fri, 2020-08-28 09:11
0
774 by brspurri
Fri, 2020-08-28 09:11
Normal topic IL-2 gets better binding with beta / gamma
by tonycheng1688 » Wed, 2022-05-25 10:23
0
780 by tonycheng1688
Wed, 2022-05-25 10:23
Normal topic Residue selector
by Alison_Yajie » Wed, 2020-06-17 19:57
0
781 by Alison_Yajie
Thu, 2020-06-18 09:47
Normal topic Local docking- should I use KIC?
by seayoung lee » Fri, 2022-05-27 02:45
0
789 by seayoung lee
Fri, 2022-05-27 02:45
Normal topic Metal Ion in symmetric design
by tschiex » Wed, 2020-07-08 05:28
0
794 by tschiex
Wed, 2020-07-08 05:28
Normal topic "Residue 7 was disulfide bonded but had no partner" with antibody.linuxgccrelease
by Sunyp_IM » Thu, 2020-06-04 05:53
0
794 by Sunyp_IM
Thu, 2020-06-04 05:54
Normal topic Design of multimeric protein
by ldlamini » Mon, 2021-01-11 07:23
0
798 by ldlamini
Mon, 2021-01-11 07:23
Normal topic snugdock run error: Sequence for partner1 does not match first member of ensemble1
by pagumaaaaa » Fri, 2022-03-25 01:21
0
802 by pagumaaaaa
Fri, 2022-03-25 01:21
Normal topic Problems with waters in CoupledMoves application
by Corvin » Tue, 2021-11-16 07:16
0
806 by Corvin
Tue, 2021-11-16 07:22
Normal topic Can remodel really handle multiple insertions in one simulation?
by lanselibai » Sat, 2019-12-28 12:51
0
806 by lanselibai
Sat, 2019-12-28 12:51
Normal topic RemodelMover and Input Pose
by ozyo » Tue, 2020-12-29 09:41
0
811 by ozyo
Tue, 2020-12-29 09:41
Normal topic Comparative Modeling Templates for Protein with Multiple Domains
by Morrian_Lynn » Wed, 2020-03-04 10:42
0
813 by Morrian_Lynn
Wed, 2020-03-04 10:42
Normal topic Does antibody_numbering_converter support camelid antibody?
by mxp » Tue, 2020-07-07 01:21
0
815 by mxp
Tue, 2020-07-07 01:21

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