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Rosetta 3 - Applications

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Topic / Topic startersort descending Replies Views Last post
Normal topic using piper-flexpepdock
by syntekabio2019 » Thu, 2019-12-12 01:22
0
496 by syntekabio2019
Thu, 2019-12-12 01:22
Normal topic Using residue patches in AbinitioRelax
by kent » Fri, 2018-11-02 11:19
1
918 by rmoretti
Wed, 2018-11-21 15:40
Normal topic Using Rmsd RosettaScripts filter with alignment files
by bjharris » Sun, 2020-11-08 15:51
1
247 by rmoretti
Sun, 2020-11-08 18:56
Normal topic Using Rosetta Docking for nucleic acids
by Adrien Guilhot » Thu, 2011-04-28 06:16
3
3,743 by Adrien Guilhot
Mon, 2014-04-21 06:47
Normal topic using Rosetta to compute pH dependent binding?
by JuliusSu » Sun, 2014-06-15 20:28
3
2,958 by rmoretti
Tue, 2014-06-17 08:51
Normal topic variable length fragments for Ab initio
by attesor » Wed, 2015-07-01 06:13
7
4,667 by rmoretti
Tue, 2015-08-18 16:47
Normal topic very good I_sc values (if not too good)
by attesor » Tue, 2015-11-03 03:30
2
1,960 by attesor
Tue, 2015-11-17 07:36
Normal topic VH-VL Orientation in antibody
by sujigeorge1979 » Mon, 2019-06-17 01:23
1
690 by jeliazkov
Mon, 2019-06-17 06:03
Normal topic wallpaper symmetry definition file
by aaj » Fri, 2016-02-26 08:40
0
880 by aaj
Fri, 2016-02-26 08:40
Normal topic Warning messages in Interface analyzer output
by Pernille » Wed, 2015-03-25 00:53
4
3,010 by rmoretti
Tue, 2015-03-31 08:20
Normal topic Warning: Fold tree is not set properly for density scoring
by ahansel » Mon, 2020-07-13 10:50
1
398 by danpf
Tue, 2020-07-14 10:27
Normal topic Warnings during relax
by cossio » Thu, 2018-10-11 14:42
2
1,309 by rmoretti
Mon, 2019-11-04 13:56
Normal topic Weighted scores??
by sizhang » Wed, 2018-12-05 15:22
0
489 by sizhang
Wed, 2018-12-05 15:22
Normal topic weights for pH_protocol
by fmerino » Wed, 2017-04-26 07:14
1
1,208 by rmoretti
Thu, 2017-04-27 07:10
Normal topic What are "-nstruct" and "cluster_histogram.txt" for "clustering.py"?
by lanselibai » Fri, 2014-10-17 06:06
3
19,748 by rmoretti
Fri, 2014-10-17 10:17
Normal topic what does initialize_rigid_body_dofs do?
by attesor » Mon, 2015-10-26 05:12
3
2,643 by rmoretti
Tue, 2015-11-10 11:35
Normal topic What is a rational minimal value for the "-nstruct" option
by Sunyp_IM » Fri, 2020-05-22 01:28
3
731 by nannemdp
Sun, 2020-05-24 14:46
Normal topic What is an SS0 predictor?
by ojmel » Fri, 2021-04-02 14:25
0
95 by ojmel
Mon, 2021-04-12 07:50
Normal topic What is interface_cutoff_distance? And why did my residues outside this value get designed?
by chrisHKL » Fri, 2020-02-28 14:52
0
315 by chrisHKL
Fri, 2020-02-28 14:52
Normal topic What means "[ ERROR ] TIME_STAMP: AbrelaxMover: finished ...NO_BATCH S_0001."
by Corvin » Thu, 2020-04-02 00:16
0
354 by Corvin
Thu, 2020-04-02 00:16
Normal topic When using "screening job files" in small molecule-docking I get: Residue type already exists in the cache Error
by Martin Floor » Thu, 2020-09-17 06:01
4
719 by Martin Floor
Tue, 2020-09-22 00:48
Normal topic where is generate_ligens.linuxgccrelease?
by Nicole Deng » Thu, 2020-12-03 00:00
2
368 by Nicole Deng
Fri, 2020-12-18 00:28
Normal topic where is pdb2vall.py
by tevang » Thu, 2013-01-24 13:35
7
4,774 by dktest
Mon, 2014-04-21 06:47
Normal topic Where is the RosettaHoles2 executable?
by lah435 » Mon, 2012-06-04 15:15
11
5,701 by smlewis
Mon, 2014-04-21 06:47
Normal topic where to look for positive sign for solution in mr-rosetta3.4?
by lchen » Tue, 2012-07-10 09:38
2
2,225 by lchen
Mon, 2014-04-21 06:47
Normal topic Why do non proten ligands get a very high score in kinematic loop modeling/ in general?
by a_s_a » Wed, 2011-06-15 00:03
8
5,312 by a_s_a
Mon, 2014-04-21 06:47
Normal topic Why is proline hydroxylated?
by kwonglynn » Tue, 2013-06-25 02:38
3
3,892 by rmoretti
Mon, 2014-04-21 06:48
Normal topic why is talaris2014 scoring fuction not used with ligand docking?
by banshee » Fri, 2016-09-09 01:19
1
1,348 by rmoretti
Fri, 2016-09-09 07:47
Normal topic Why there are two outputs using pmut_scan_parallel.linuxgccrelease with a mutant list file?
by lanselibai » Sun, 2014-11-16 10:26
3
2,435 by G Mustafa
Thu, 2018-10-18 05:31
Normal topic Write error during saving of PDB-file after working with it in the Rosetta through Unix terminal
by Corvin » Thu, 2019-04-25 01:20
2
920 by Corvin
Wed, 2019-06-12 00:04
Normal topic Write one's own constraint type
by djpittdj » Thu, 2012-11-08 12:29
7
4,515 by smlewis
Mon, 2014-04-21 06:47
Normal topic Writing down properties for new atom types
by Corvin » Tue, 2021-01-12 04:30
0
121 by Corvin
Wed, 2021-01-13 04:00
Normal topic xyzVector error in Enzyme design
by ajmbarbosa » Tue, 2016-01-05 09:46
3
2,734 by rmoretti
Fri, 2016-06-17 10:36
Normal topic Zero residues error in docking
by cjy318 » Tue, 2020-07-28 19:47
0
277 by cjy318
Tue, 2020-07-28 19:47
Normal topic zero standard deviation of I_sc in protein-protein docking
by rohi » Fri, 2020-07-03 22:19
0
263 by rohi
Fri, 2020-07-03 22:20
Normal topic [Solved] Resetting a pose with RigidBodyTransMover
by bjharris » Wed, 2021-01-13 14:01
1
201 by bjharris
Fri, 2021-01-22 17:34
Normal topic [Solved] RosettaAntibody3 - Grafting step is failing to detect H3 from the input sequence
by brspurri » Mon, 2021-01-04 16:46
1
226 by brspurri
Mon, 2021-01-18 18:14
Normal topic [SOLVED] swamped memory
by fred » Fri, 2011-09-16 08:19
13
7,771 by fred
Mon, 2014-04-21 06:47
Normal topic [SOLVED]core.io.silent: [ WARNING ] ...
by fred » Wed, 2011-10-05 07:38
8
5,174 by fred
Mon, 2014-04-21 06:47
Normal topic [TopologyBroker Exception]: BBTorsion at pos 468unitialized...unclaimed
by tevang » Wed, 2013-04-10 15:07
5
3,068 by rmoretti
Mon, 2014-04-21 06:47
Normal topic  The error of InterfaceAnalyzer
by asbelx » Thu, 2017-12-21 19:04
3
2,114 by smlewis
Sat, 2017-12-23 15:56

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