You are here

Rosetta 3 - General

Pages

Topic / Topic starter Replies Views Last postsort descending
Sticky topic Sticky: FAQ
by admin » Mon, 2010-08-30 04:16
0
5,003 by admin
Fri, 2015-09-04 16:17
Normal topic Noncanonical amino acid HIP
by Victor » Fri, 2014-01-31 07:45
2
1,861 by Victor
Fri, 2014-01-31 10:41
Normal topic Interface energy vs binding energy
by Apiwat » Wed, 2014-02-05 00:47
2
2,514 by Apiwat
Sat, 2014-02-08 01:41
Normal topic Can rosetta model cyclic peptide?
by Apiwat » Fri, 2014-02-07 02:08
1
1,166 by rmoretti
Tue, 2014-02-11 06:24
Normal topic How to calculate the binding energy of peptide and a protein?
by tianbu » Thu, 2014-02-13 20:44
9
5,430 by tianbu
Mon, 2014-02-17 03:36
Normal topic Number of conformations needed
by JadAbbass » Sun, 2014-02-16 13:21
2
1,061 by JadAbbass
Tue, 2014-02-18 07:27
Normal topic smoothly kill a mpirun process
by fred » Tue, 2014-02-18 06:06
2
2,963 by Ashafix
Wed, 2014-02-19 06:53
Normal topic Determining Rosetta version from directory
by linucks » Fri, 2014-02-28 04:04
1
1,014 by smlewis
Fri, 2014-02-28 05:45
Normal topic Rigid Body & Flexible Minimization
by Hanieh » Thu, 2014-02-06 12:37
2
1,704 by Hanieh
Fri, 2014-02-28 12:43
Normal topic Resfile
by vijayaraj81 » Thu, 2014-02-27 01:14
8
3,760 by vijayaraj81
Tue, 2014-03-04 05:07
Normal topic Does RNA parses checkpoint matrix as well as protein
by qlj » Wed, 2014-03-05 06:03
2
1,146 by qlj
Thu, 2014-03-06 22:20
Normal topic make_fragment.pl Error!
by Apiwat » Sat, 2014-02-15 13:35
12
6,603 by Apiwat
Tue, 2014-03-11 09:42
Normal topic Reproducing Rosetta++ scoring function with Rosetta 3?
by JuliusSu » Mon, 2014-03-17 21:15
7
3,274 by JuliusSu
Wed, 2014-03-19 20:38
Normal topic running Rosetta locally using commands generated by the Robetta web server
by cneale » Sat, 2014-03-15 11:48
3
2,035 by cneale
Fri, 2014-03-21 18:13
Normal topic Difference between checkpoint file and PSSM for making fragments
by qlj » Fri, 2014-03-21 22:00
1
2,559 by rmoretti
Sat, 2014-03-22 11:40
Normal topic How to allow rosetta to recognize the ASP and protonated ASP?
by Jeffrey_Chen » Mon, 2014-03-24 20:34
2
1,912 by Jeffrey_Chen
Tue, 2014-03-25 23:06
Normal topic what rotamer lib is used in rosetta3.5?
by Lindsay » Thu, 2014-02-06 16:11
6
2,756 by rmoretti
Fri, 2014-03-28 09:03
Normal topic how to identify selected interface residues
by vijayaraj81 » Mon, 2014-03-31 01:40
3
1,810 by rmoretti
Tue, 2014-04-01 08:12
Normal topic # decoys of silent
by fred » Wed, 2014-04-02 06:00
3
1,328 by fred
Fri, 2014-04-04 11:34
Normal topic backrub score different from calculated score
by attesor » Wed, 2014-04-09 07:34
3
1,529 by rmoretti
Thu, 2014-04-10 07:38
Normal topic dG/dsasa , What is the exact meaning?
by Apiwat » Sun, 2014-04-13 00:38
2
1,679 by Apiwat
Thu, 2014-04-17 09:56
Normal topic Cluster application, How does it sort decoys by energy?
by Apiwat » Wed, 2014-04-16 01:52
2
1,336 by Apiwat
Thu, 2014-04-17 09:56
Normal topic Binary silent Output file reading problem
by wlzhang » Sun, 2014-04-20 17:47
1
993 by wlzhang
Sun, 2014-04-20 18:17
Normal topic ERROR: PDB reader is ignoring atom
by phanvy » Wed, 2014-04-16 17:59
2
1,545 by phanvy
Mon, 2014-04-21 03:58
Normal topic Getting started with Rosetta
by myang » Tue, 2009-04-07 16:25
1
1,351 by smlewis
Mon, 2014-04-21 06:47
Normal topic backrub and design
by jtmacd » Thu, 2009-06-04 08:44
1
1,038 by jtmacd
Mon, 2014-04-21 06:47
Normal topic how to docking including HETATM
by tricia » Tue, 2009-05-05 22:03
1
1,224 by smlewis
Mon, 2014-04-21 06:47
Normal topic error running rosetta3.0
by aschoenr » Wed, 2009-06-10 13:57
1
1,431 by jtmacd
Mon, 2014-04-21 06:47
Normal topic How to run Rosetta3 in parallel
by lennylv » Mon, 2009-03-30 04:21
6
4,549 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Modeling only part of the protein structure using ROSETTA
by qiongwu » Fri, 2009-05-29 09:08
5
1,832 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to keep native structure when do loop modeling
by zlni » Sun, 2009-05-03 10:12
4
1,648 by zlni
Mon, 2014-04-21 06:47
Normal topic distance contraints file
by tricia » Wed, 2009-06-10 13:28
0
720 by tricia
Mon, 2014-04-21 06:47
Normal topic modeling loops between domains
by dhorita » Thu, 2009-03-05 14:48
6
2,190 by jarod
Mon, 2014-04-21 06:47
Normal topic How to input constraints?
by violetsha7 » Wed, 2009-05-13 00:13
7
4,932 by smlewis
Mon, 2014-04-21 06:47
Normal topic Ab Initio structure prediction
by abhishek » Tue, 2009-04-21 23:37
0
805 by abhishek
Mon, 2014-04-21 06:47
Normal topic possible idealize app bug - residues being deleted
by jtmacd » Mon, 2009-06-08 06:27
2
1,159 by jtmacd
Mon, 2014-04-21 06:47
Normal topic unit and scientific tests
by tricia » Sat, 2009-05-09 23:29
1
942 by smlewis
Mon, 2014-04-21 06:47
Normal topic Radius of Gyration
by ctaylor » Mon, 2009-09-21 12:45
2
2,038 by ctaylor
Mon, 2014-04-21 06:47
Normal topic rebuilding and refinement
by exchhattu » Tue, 2009-10-06 21:13
1
924 by smlewis
Mon, 2014-04-21 06:47
Normal topic Structure Prediction: Max Sequence Length?
by jcsaborio » Tue, 2009-07-14 12:10
2
1,972 by jcsaborio
Mon, 2014-04-21 06:47
Normal topic ligand dock residue selection
by Silice » Wed, 2009-08-12 08:57
2
1,171 by frichter
Mon, 2014-04-21 06:47
Normal topic Rosetta movie.
by exchhattu » Mon, 2009-09-14 21:02
1
1,016 by smlewis
Mon, 2014-04-21 06:47
Normal topic ERROR: Unable to open file: ./1brs_0001.pdb
by dkeidel » Tue, 2009-09-29 17:46
1
1,392 by smlewis
Mon, 2014-04-21 06:47
Hot topic SCons compilation error (Windows XP, 32bit)
by CRickert » Mon, 2009-08-03 00:57
28
9,548 by Marsia
Mon, 2014-04-21 06:47
Normal topic Problems in installing Rosetta3 in Red Hat Linux
by jjz2009 » Mon, 2009-08-24 19:16
1
1,000 by smlewis
Mon, 2014-04-21 06:47
Normal topic make_fragments
by ctaylor » Mon, 2009-09-21 12:41
2
1,226 by ctaylor
Mon, 2014-04-21 06:47
Normal topic Rosetta 3.1 seg faults gcc while compiling on Fedora 11
by jtmacd » Fri, 2009-10-02 05:26
1
1,076 by smlewis
Mon, 2014-04-21 06:47
Normal topic energy units
by jtmacd » Mon, 2009-07-06 10:39
1
2,374 by smlewis
Mon, 2014-04-21 06:47
Normal topic Public subversion / Enzyme design public app
by weallen » Tue, 2009-08-11 20:50
6
2,113 by weallen
Mon, 2014-04-21 06:47
Normal topic Intermediate file insertion
by exchhattu » Wed, 2009-09-02 18:44
2
1,042 by exchhattu
Mon, 2014-04-21 06:47
Normal topic ClusterApp hogs way too much memory...
by IgaK » Tue, 2009-09-29 00:14
5
1,877 by w107kdk
Mon, 2014-04-21 06:47
Normal topic RosettaHoles?
by kbala » Thu, 2009-07-30 16:52
3
1,708 by smlewis
Mon, 2014-04-21 06:47
Normal topic Homology modeling
by mchldln » Mon, 2009-08-17 13:04
2
2,011 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta on snow leopard?
by nitroamos » Thu, 2009-10-01 17:07
3
2,264 by nitroamos
Mon, 2014-04-21 06:47
Normal topic Modelling Sheets
by monteirotorres » Thu, 2009-07-02 11:41
2
1,228 by monteirotorres
Mon, 2014-04-21 06:47
Normal topic Protein-Protein Docking
by hwillis » Fri, 2009-08-07 01:31
1
1,289 by smlewis
Mon, 2014-04-21 06:47
Normal topic Ab initio/relax flag file setup
by w107kdk » Fri, 2009-08-28 11:49
4
1,919 by w107kdk
Mon, 2014-04-21 06:47
Normal topic Installing rosetta 3.0
by dalemu » Thu, 2009-09-24 13:28
1
1,390 by smlewis
Mon, 2014-04-21 06:47
Normal topic build parallel version of Rosetta
by atfrank » Tue, 2009-10-06 22:33
2
2,018 by smlewis
Mon, 2014-04-21 06:47
Normal topic MoveMap file for backrub
by jiyongpark.77 » Sat, 2009-07-18 03:53
1
1,192 by smlewis
Mon, 2014-04-21 06:47
Normal topic Modeling
by hwillis » Wed, 2009-08-12 11:07
1
956 by frichter
Mon, 2014-04-21 06:47
Normal topic Installing Rosetta Abinitio make_fragments.pl
by ctaylor » Thu, 2009-09-17 09:20
2
1,602 by ctaylor
Mon, 2014-04-21 06:47
Normal topic Problems compiling tests
by molon » Wed, 2009-09-30 07:33
2
1,433 by molon
Mon, 2014-04-21 06:47
Normal topic FixBB design design_contrast
by swoody » Tue, 2009-06-30 11:48
2
1,246 by swoody
Mon, 2014-04-21 06:47
Normal topic PDB HETATM
by hwillis » Thu, 2009-08-06 12:03
2
2,064 by smlewis
Mon, 2014-04-21 06:47
Normal topic demo documentation
by lshi » Fri, 2009-08-28 08:51
1
901 by smlewis
Mon, 2014-04-21 06:47
Normal topic manually changing fixbb residue ref energies
by jtmacd » Wed, 2009-11-25 08:43
4
1,591 by jtmacd
Mon, 2014-04-21 06:47
Normal topic membrane modeling error!
by wtscrystal » Wed, 2009-12-09 21:28
3
2,329 by arthuc01
Mon, 2014-04-21 06:47
Normal topic Checkpoints in Rosetta
by exchhattu » Mon, 2009-10-19 17:47
2
1,305 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Only 430 models are generated for membrane prediction
by justin » Wed, 2010-01-06 00:04
3
1,507 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta 3.1-how to run parallel tasks?
by wtscrystal » Fri, 2009-11-06 03:23
4
2,869 by lqzhang
Mon, 2014-04-21 06:47
Normal topic Rosetta membrane prediction!
by wtscrystal » Tue, 2009-11-17 05:55
0
1,571 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic activation of filters in rosetta3.0 or later
by exchhattu » Thu, 2009-12-03 17:52
2
1,164 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Citing Rosetta3.0
by ctaylor » Fri, 2009-10-09 11:42
1
2,687 by smlewis
Mon, 2014-04-21 06:47
Normal topic using constraints with AbinitioRelax (Rosetta 3.1)
by ndousis » Fri, 2009-12-18 08:56
8
4,192 by ndousis
Mon, 2014-04-21 06:47
Normal topic how to do ensemble docking using rosetta3.1
by lqzhang » Mon, 2010-01-11 10:31
1
961 by sid
Mon, 2014-04-21 06:47
Normal topic Error in RMSD calculation when native sequence deviates
by abdullah » Tue, 2009-11-10 08:56
1
1,388 by smlewis
Mon, 2014-04-21 06:47
Normal topic Ab Initio folding of protein with multiple chains?
by myang » Tue, 2009-11-24 13:01
0
765 by myang
Mon, 2014-04-21 06:47
Normal topic Parallel Installation of ROSETTA3.1
by anirbanzz » Mon, 2009-12-07 21:09
1
1,050 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problems in Loop Modeling
by jklett » Mon, 2009-10-19 07:26
2
1,576 by jklett
Mon, 2014-04-21 06:47
Normal topic Clustering Poses from RosettaDock
by ctaylor » Tue, 2009-12-29 06:38
0
750 by ctaylor
Mon, 2014-04-21 06:47
Normal topic how same random seeds can be used in rosetta for mpi run.
by exchhattu » Wed, 2009-10-28 22:09
1
1,425 by smlewis
Mon, 2014-04-21 06:47
Normal topic Could somebody interpret the rosetta's cluster application result?
by exchhattu » Mon, 2009-11-16 01:58
0
837 by exchhattu
Mon, 2014-04-21 06:47
Normal topic the problem in making fragments
by croshong » Thu, 2009-12-03 17:15
1
1,225 by smlewis
Mon, 2014-04-21 06:47
Normal topic Resfile for fixed backbone design
by dyq » Wed, 2009-10-07 10:50
5
2,260 by attesor
Mon, 2014-04-21 06:47
Normal topic RNA & protein folding
by sdh » Thu, 2009-12-17 00:58
0
789 by sdh
Mon, 2014-04-21 06:47
Normal topic Intel Compiler and OS X Intel
by bene » Tue, 2009-10-20 10:20
1
1,102 by smlewis
Mon, 2014-04-21 06:47
Normal topic Can Rosetta generate proteins with sidechains ?
by wszjzhang » Fri, 2010-01-08 08:26
1
1,081 by smlewis
Mon, 2014-04-21 06:47
Normal topic the meaning of "maxsub" in score.fsc
by exchhattu » Tue, 2009-11-10 04:37
2
1,730 by smlewis
Mon, 2014-04-21 06:47
Normal topic (eliminated)
by jiyongpark.77 » Tue, 2009-11-24 00:56
0
756 by jiyongpark.77
Mon, 2014-04-21 06:47
Normal topic 3.1 CLUSTERING OUTPUT
by w107kdk » Mon, 2009-12-07 13:10
0
886 by w107kdk
Mon, 2014-04-21 06:47
Normal topic Make_fragments.pl database
by TiagoGomes » Tue, 2009-10-13 11:31
2
1,390 by TiagoGomes
Mon, 2014-04-21 06:47
Normal topic Silent Files
by ctaylor » Tue, 2009-12-22 09:22
3
1,374 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to use Rosetta 3.1 to model the structure of an antibody?
by sylvia » Mon, 2009-10-26 14:06
2
1,726 by vanita
Mon, 2014-04-21 06:47
Normal topic Rosetta and SAM 3.5!
by wtscrystal » Sat, 2009-11-14 22:49
0
1,095 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic compile make_fragments.pl
by justin » Wed, 2009-12-02 00:42
0
803 by justin
Mon, 2014-04-21 06:47
Normal topic ab initio protein structure prediction
by croshong » Wed, 2009-12-16 23:25
1
993 by smlewis
Mon, 2014-04-21 06:47
Normal topic Site-wide installations and 64-bit builds
by bene » Tue, 2009-10-20 10:16
1
899 by smlewis
Mon, 2014-04-21 06:47
Normal topic should rosetta3.1 do prepacking before docking?
by lqzhang » Thu, 2010-01-07 12:15
3
1,407 by smlewis
Mon, 2014-04-21 06:47
Normal topic Does Rosetta 3.1 have the 9999 limitation?
by wtscrystal » Sat, 2009-11-07 01:18
1
1,024 by smlewis
Mon, 2014-04-21 06:47

Pages

New posts
No new posts
Hot topic with new posts
Hot topic without new posts
Sticky topic
Locked topic
Subscribe to RSS - Rosetta 3 - General