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Rosetta 3 - General
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known disulfides in Remodel sequence by matteoferla » Mon, 2018-09-10 06:43 |
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1,828 |
by matteoferla Thu, 2018-09-13 06:21 |
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ddG of multiple mutations on a monomer by hltorresvera » Mon, 2021-02-01 16:54 |
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2,215 |
by paulbo Sun, 2024-02-04 22:03 |
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model protein at low pH by ytao » Mon, 2012-11-05 07:52 |
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2,931 |
by smlewis Mon, 2014-04-21 06:47 |
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Atom_.cc line 304 by fred » Thu, 2014-09-11 12:04 |
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2,160 |
by rmoretti Fri, 2014-09-12 09:11 |
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What is "repack", "prepack"? by cossio » Wed, 2015-11-04 17:59 |
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6,015 |
by rmoretti Tue, 2015-11-10 11:52 |
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"abinitio" with mpi by al614 » Wed, 2016-10-12 12:17 |
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2,317 |
by rmoretti Fri, 2016-10-14 15:46 |
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Rosetta changing Atom Name in PDB ATOM record? by chrisHKL » Tue, 2020-03-03 20:50 |
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1,560 |
by smlewis Wed, 2020-03-04 07:40 |
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unit and scientific tests by tricia » Sat, 2009-05-09 23:29 |
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2,133 |
by smlewis Mon, 2014-04-21 06:47 |
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Adding NCAA with Metal Ion by MustafaBughio » Mon, 2022-11-28 15:07 |
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843 |
by JasonIsaac Mon, 2022-12-05 18:41 |
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angle constraints by gw » Tue, 2011-07-19 07:49 |
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2,545 |
by smlewis Mon, 2014-04-21 06:47 |
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Docking individual residue ussing RosettaDock by a-eatemadi@razi... » Wed, 2017-09-06 05:50 |
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1,738 |
by rmoretti Wed, 2017-09-06 08:47 |
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scoring function changed from 2.3? by jarod » Mon, 2010-04-12 18:56 |
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2,002 |
by smlewis Mon, 2014-04-21 06:47 |
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Bug in LoopMover_Refine_Backrub.cc ? by SunH » Wed, 2010-12-15 00:08 |
1 |
2,201 |
by smlewis Mon, 2014-04-21 06:47 |
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how to add constrains in flexible peptide docking by kingbo2008 » Fri, 2011-04-29 07:55 |
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2,384 |
by smlewis Mon, 2014-04-21 06:47 |
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RMS in Score Application by brspurri » Thu, 2011-12-29 09:19 |
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4,079 |
by smlewis Mon, 2014-04-21 06:47 |
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Using logic in resfile, Rosetta Scripts by tsztain » Wed, 2017-03-22 13:50 |
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1,808 |
by smlewis Wed, 2017-03-22 14:02 |
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Modeling transmembrane and intracellular domain by Sunyp_IM » Sun, 2018-04-08 06:44 |
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1,719 |
by jkleman Sat, 2018-04-14 10:55 |
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The question about FavorNativeResidue by asbelx » Fri, 2019-04-12 20:02 |
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1,743 |
by rmoretti Tue, 2019-07-09 15:57 |
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Unrecognized D-Leu name / C-terminal ACE by almeida85 » Thu, 2022-08-11 07:43 |
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724 |
by almeida85 Fri, 2022-08-12 05:56 |
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Error about rifdocking by ng98 » Mon, 2024-01-08 16:21 |
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253 |
by rmoretti Tue, 2024-01-09 23:41 |
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new installation on local computer problem by lqzhang » Mon, 2010-02-01 08:41 |
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1,955 |
by smlewis Mon, 2014-04-21 06:47 |
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Structure prediction based on template -> Documentation comparative modeling of protein structures by maxebert » Sun, 2011-03-20 01:15 |
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3,193 |
by rmoretti Mon, 2014-04-21 06:47 |
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tyrosine structure error by dave » Mon, 2012-04-30 04:38 |
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2,197 |
by frichter Mon, 2014-04-21 06:47 |
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Reproducing Robetta AB initio setup by jason-rosetta » Sat, 2014-10-04 04:26 |
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2,358 |
by jadolfbr Fri, 2014-10-31 08:55 |
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Structure refinement with RDC constraint by shushunur » Thu, 2018-01-18 00:44 |
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2,248 |
by rmoretti Tue, 2018-01-30 09:08 |
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Program frozen at "protocols.jobdist.JobDistributors: (0) Master Node -- Waiting for job request; tag_ = 1" by Xinhang » Sat, 2020-04-11 14:30 |
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1,709 |
by vmulligan Sat, 2020-04-11 17:40 |
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I Need Help on Validation for a Ligand Docking Experiment. by tbelec » Sat, 2021-03-20 13:27 |
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1,659 |
by matteoferla Mon, 2021-03-22 08:29 |
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How to get fragment library from robetta server for mre than 1000 residue sequence? by Danielsebas » Wed, 2019-09-18 07:53 |
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1,537 |
by rmoretti Wed, 2019-09-18 10:49 |
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protein design for increasing its affinity towards ligand by rohi » Fri, 2020-10-30 11:33 |
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1,395 |
by rmoretti Tue, 2021-02-09 12:25 |
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Multi-metric enzyme docking with substrate by Wang Zhe » Sat, 2021-11-20 04:41 |
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1,091 |
by matteoferla Mon, 2021-12-13 02:27 |
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Structure Prediction of protein mutant using relax by Delfosse57 » Tue, 2023-01-10 13:26 |
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652 |
by JW_24 Tue, 2023-01-24 04:55 |
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Design on NMR template by enoee » Wed, 2010-07-21 05:29 |
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1,963 |
by smlewis Mon, 2014-04-21 06:47 |
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All possible mutations by abdullah_ahmed » Tue, 2011-01-04 02:11 |
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2,426 |
by smlewis Mon, 2014-04-21 06:47 |
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How to site the scoring application in rosetta3.1? by doranhen » Thu, 2012-07-05 10:07 |
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2,479 |
by smlewis Mon, 2014-04-21 06:47 |
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fragment_picker error secondarysimilarity.cc line:132 by leanawen » Mon, 2013-04-15 14:33 |
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2,163 |
by smlewis Mon, 2014-04-21 06:47 |
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Is there a way to calculate chi1 and chi1+chi differences between two structures? by sn » Thu, 2017-04-20 21:46 |
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2,110 |
by rmoretti Fri, 2017-04-21 07:52 |
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Sequence symmetry during FastDesign for repeat protein design by cttm4a1 » Tue, 2022-09-06 21:02 |
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720 |
by rmoretti Wed, 2022-09-07 09:19 |
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Error in Running Symmetry Docking cutpoint. by Jacob » Wed, 2011-06-01 08:21 |
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2,349 |
by smlewis Mon, 2014-04-21 06:47 |
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Difference between checkpoint file and PSSM for making fragments by qlj » Fri, 2014-03-21 22:00 |
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4,801 |
by rmoretti Sat, 2014-03-22 11:40 |
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ligand flexibility by dave » Thu, 2015-02-12 08:48 |
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2,221 |
by rmoretti Wed, 2015-02-18 09:17 |
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Problem with match on enzdes by ahuls1 » Thu, 2021-07-29 13:21 |
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1,223 |
by ahuls1 Thu, 2021-07-29 13:23 |
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Knowledge check on steric effects by pachecoj » Thu, 2014-10-16 09:13 |
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2,401 |
by rmoretti Thu, 2014-10-16 10:33 |
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I've got two doubts by jrcf » Sun, 2016-01-10 07:45 |
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2,013 |
by smlewis Sun, 2016-01-10 10:02 |
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Sequence Profile/Checkpoint file by ojmel » Fri, 2021-04-02 17:29 |
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1,275 |
by taylorjones Mon, 2021-04-05 13:17 |
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Ambiguous constraints are ignored in ab initio by mschneid » Wed, 2014-06-18 04:33 |
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2,367 |
by rmoretti Tue, 2014-07-01 12:21 |
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Docking Local Refine Not Moving Input by SenyorDrew » Sat, 2017-10-21 08:26 |
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1,686 |
by SenyorDrew Mon, 2017-11-20 13:27 |
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How did you begin to learn Rosetta? by mdeklotz » Mon, 2018-07-30 10:08 |
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2,219 |
by jkleman Tue, 2018-07-31 13:19 |
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Fragment Picker score type weights by wellsm10 » Mon, 2020-12-14 13:05 |
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1,462 |
by dgront Thu, 2021-02-11 08:30 |
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error in cluster running by albumns » Mon, 2011-09-05 00:24 |
1 |
2,577 |
by rmoretti Mon, 2014-04-21 06:47 |
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How to install Rosetta in Redhat Linux ? by ajaniharesh » Fri, 2012-02-24 02:32 |
1 |
5,527 |
by smlewis Mon, 2014-04-21 06:47 |
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Scoring when the protein is a different length by gw » Wed, 2012-08-01 08:53 |
1 |
2,918 |
by smlewis Mon, 2014-04-21 06:47 |
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Problem with the top 25 fragments used in the library of 200 nine-residue fragments in AbinitioRelax by MA » Wed, 2017-07-26 01:12 |
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1,583 |
by rmoretti Mon, 2017-08-21 09:55 |
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loop modelling on complex structure by Tianyang89 » Fri, 2020-09-18 07:24 |
1 |
1,343 |
by amelie.stein Mon, 2020-09-28 10:41 |
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Rosetta Dock by swoody » Tue, 2009-11-10 16:20 |
1 |
3,007 |
by smlewis Mon, 2014-04-21 06:47 |
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packing option "explicit_h2o" and "solvate" by SunH » Wed, 2010-11-17 00:03 |
1 |
2,517 |
by smlewis Mon, 2014-04-21 06:47 |
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Antibody Modeling Question by rbehan » Fri, 2016-02-05 13:57 |
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1,906 |
by jadolfbr Fri, 2016-02-05 15:32 |
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Applying dihedral constraints to TRP dipeptide minimization. ACE/NME termni. by reoverstreet » Mon, 2022-07-11 14:39 |
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864 |
by matteoferla Wed, 2022-07-20 10:33 |
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demo documentation by lshi » Fri, 2009-08-28 08:51 |
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2,180 |
by smlewis Mon, 2014-04-21 06:47 |
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What's the unit of Rosetta energy function? by Run » Tue, 2014-06-24 00:44 |
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6,238 |
by rmoretti Tue, 2014-07-01 12:45 |
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How to extract antibody from a set of pdb file may may contain antigen? by Sunyp_IM » Mon, 2017-11-13 17:11 |
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1,632 |
by ac.research Sat, 2017-11-18 06:54 |
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mpi + mp_mutate_relax by decrSTL » Thu, 2020-01-16 10:47 |
1 |
1,552 |
by jkleman Thu, 2020-01-16 11:05 |
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Getting started with Rosetta by myang » Tue, 2009-04-07 16:25 |
1 |
2,612 |
by smlewis Mon, 2014-04-21 06:47 |
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what kind of focefield does Rosetta based on? by albumns » Tue, 2010-07-06 11:08 |
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2,168 |
by smlewis Mon, 2014-04-21 06:47 |
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NMR / NOE related tools in 3.2 ? by smg3d » Sun, 2011-02-06 06:11 |
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2,308 |
by smlewis Mon, 2014-04-21 06:47 |
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secondary structure prediction for generation of fragment libraries by xpzhang » Sat, 2011-06-25 00:47 |
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3,571 |
by smlewis Mon, 2014-04-21 06:47 |
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missing amino acid by berk » Fri, 2013-06-14 06:07 |
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2,003 |
by smlewis Mon, 2014-04-21 06:48 |
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Computing pairwise energies for rotamers by pachecoj » Sat, 2014-05-03 17:52 |
1 |
2,222 |
by rmoretti Mon, 2014-05-12 07:50 |
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Output fasta of enzdes generated pdbs by eyong123 » Tue, 2015-05-19 08:07 |
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2,280 |
by rmoretti Mon, 2015-05-25 11:07 |
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multiple symmetry definition files by sdh_h » Wed, 2016-06-29 09:31 |
1 |
1,894 |
by rmoretti Wed, 2016-06-29 10:20 |
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Fixing certain residues during refinement by ckdenist » Thu, 2019-08-29 14:00 |
1 |
1,801 |
by jadolfbr Thu, 2019-08-29 14:29 |
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problems in building rosetta3.1 (solved) by zpliu09 » Wed, 2010-03-31 02:03 |
1 |
2,029 |
by smlewis Mon, 2014-04-21 06:47 |
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decoy vs pose by Anonymous » Fri, 2012-06-15 02:46 |
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2,751 |
by smlewis Mon, 2014-04-21 06:47 |
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patch file modification for ser_phosphorylated.txt by hajar » Sun, 2020-06-21 00:49 |
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1,699 |
by matteoferla Tue, 2020-06-23 10:58 |
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ERROR: Your compiler does not have full support for C++11 regex, and therefore can't support RegEx_based_CDR_Detector/antibody g by yliang20 » Mon, 2022-08-08 16:59 |
1 |
1,015 |
by rmoretti Tue, 2022-08-09 06:52 |
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unidentifiable C++ exception in both linux and window. by wajidarshad » Tue, 2015-10-27 08:12 |
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2,022 |
by rmoretti Tue, 2015-10-27 08:46 |
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Error in src/protocols/membrane/util.cc line: 1224 by renedominik » Tue, 2020-02-11 08:10 |
1 |
1,442 |
by renedominik Wed, 2020-02-12 06:16 |
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dock_mcm not found by libai2098 » Mon, 2011-03-14 00:02 |
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2,257 |
by smlewis Mon, 2014-04-21 06:47 |
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Recommendations for CoupledMoves enzyme redesign by dgm3 » Thu, 2021-03-04 10:53 |
1 |
1,344 |
by aloshbau Tue, 2021-03-09 02:47 |
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backrub and design by jtmacd » Thu, 2009-06-04 08:44 |
1 |
2,269 |
by jtmacd Mon, 2014-04-21 06:47 |
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PDB output sum by enoee » Fri, 2010-07-16 12:29 |
1 |
2,160 |
by smlewis Mon, 2014-04-21 06:47 |
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How to design a stand-alone loop from a binding interface? by guangdianzi3 » Fri, 2011-02-11 21:11 |
1 |
2,213 |
by smlewis Mon, 2014-04-21 06:47 |
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make_fragments.pl without sparks by nannemdp » Mon, 2014-06-09 13:18 |
1 |
2,267 |
by rmoretti Tue, 2014-06-10 11:34 |
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3D Structure Prediction by anirbanzz » Sat, 2010-04-17 02:47 |
1 |
2,724 |
by smlewis Mon, 2014-04-21 06:47 |
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Version of VALL Database and Corresponding Constraint Coordinate File for Fragment Generation by jurkm » Mon, 2011-05-02 03:00 |
1 |
3,260 |
by smlewis Mon, 2014-04-21 06:47 |
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Combine flags file with command line arguments? by cossio » Mon, 2014-12-22 13:52 |
1 |
3,268 |
by smlewis Tue, 2014-12-23 13:58 |
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can not find a residue type that matches the residue HIS_P:NtermProteinFull by tarsis » Wed, 2017-04-05 08:51 |
1 |
2,712 |
by rmoretti Fri, 2017-04-14 08:37 |
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Segmentation fault (core dumped) denovo_density.linuxgccrelease by ahmadkhalifa » Sun, 2018-04-15 17:52 |
1 |
2,038 |
by smlewis Mon, 2018-04-16 16:32 |
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How to determine the value size in block of *.cst files? by weifulei » Sun, 2019-05-05 19:56 |
1 |
1,686 |
by rmoretti Tue, 2019-07-09 15:48 |
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Using specific rotamers by sahn97 » Fri, 2022-08-26 13:45 |
1 |
759 |
by rmoretti Fri, 2022-08-26 14:51 |
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rebuilding and refinement by exchhattu » Tue, 2009-10-06 21:13 |
1 |
2,127 |
by smlewis Mon, 2014-04-21 06:47 |
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Changing amino acid profile while keeping the backbone conformation between 2 protein structures (need help) by seamoon » Wed, 2023-05-24 07:46 |
0 |
349 |
by seamoon Wed, 2023-05-24 07:46 |
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Error on rna_denovo_setup.py by zahra_AZ » Mon, 2020-11-09 02:23 |
0 |
1,030 |
by zahra_AZ Mon, 2020-11-09 02:23 |
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sam.predict-2nd for make_fragments.pl script by sumukh21 » Tue, 2011-02-22 17:40 |
0 |
1,602 |
by sumukh21 Mon, 2014-04-21 06:47 |
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RosettaDesign improvements by ac.research » Mon, 2018-05-14 08:27 |
0 |
1,139 |
by ac.research Mon, 2018-05-14 08:27 |
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shockingly low fragment diversity ___nnmake failed by anusmita_sahoo » Wed, 2010-03-10 21:15 |
0 |
1,517 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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[dev] examples for implementing setup_for_packing, prepare_rotamers_for_packing? by ipetrik_ambry » Mon, 2017-10-30 17:03 |
0 |
1,110 |
by ipetrik_ambry Mon, 2017-10-30 17:03 |
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Error in H3_modeling_scores.fasc file from antibody_H3 program by Brian Wiley » Sat, 2023-02-04 23:41 |
0 |
403 |
by Brian Wiley Sat, 2023-02-04 23:43 |
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How to generate a symmetry definition file for octahedral symmetry? by Anonymous » Wed, 2012-08-15 05:20 |
0 |
2,498 |
by Anonymous Mon, 2014-04-21 06:47 |
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Enzyme design gets 0 hit by cryosky » Sun, 2021-09-26 13:24 |
0 |
813 |
by cryosky Sun, 2021-09-26 13:24 |
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Rosetta membrane prediction! by wtscrystal » Tue, 2009-11-17 05:55 |
0 |
2,387 |
by wtscrystal Mon, 2014-04-21 06:47 |
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