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Rosetta 3 - General
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Rosetta changing Atom Name in PDB ATOM record? by chrisHKL » Tue, 2020-03-03 20:50 |
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233 |
by smlewis Wed, 2020-03-04 07:40 |
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Domain Insertion equivalent in Rosetta 3.2 by SenyorDrew » Wed, 2011-02-09 09:47 |
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1,304 |
by smlewis Mon, 2014-04-21 06:47 |
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About RosettaScript examples by jiongzhang » Thu, 2012-03-08 10:50 |
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1,452 |
by smlewis Mon, 2014-04-21 06:47 |
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question about the exposed strand results in beta_strand_homodimer_design demo by szypanther » Wed, 2014-06-04 00:47 |
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1,348 |
by rmoretti Mon, 2014-06-09 10:05 |
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RosettaProtein_Docking by khadkab@mcmaster.ca » Tue, 2015-06-30 11:28 |
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1,927 |
by rmoretti Fri, 2015-07-03 13:24 |
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max_nn by anusmita_sahoo » Thu, 2010-03-11 02:21 |
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1,154 |
by smlewis Mon, 2014-04-21 06:47 |
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extract pdbs segmentation fault by Swillard » Fri, 2017-09-08 07:20 |
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782 |
by rmoretti Fri, 2017-09-08 15:15 |
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How to get fragment library from robetta server for mre than 1000 residue sequence? by Danielsebas » Wed, 2019-09-18 07:53 |
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393 |
by rmoretti Wed, 2019-09-18 10:49 |
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"unrecognized aa ACT" by einew » Sat, 2011-08-27 14:58 |
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1,488 |
by smlewis Mon, 2014-04-21 06:47 |
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Can Rosetta generate proteins with sidechains ? by wszjzhang » Fri, 2010-01-08 08:26 |
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1,312 |
by smlewis Mon, 2014-04-21 06:47 |
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How to relax a protein model calling Rosetta functions from my C++ code by sncrivelli » Tue, 2011-10-25 00:16 |
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2,114 |
by smlewis Mon, 2014-04-21 06:47 |
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how to set the output name for fixbb design by Lindsay » Mon, 2012-04-30 09:32 |
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1,294 |
by smlewis Mon, 2014-04-21 06:47 |
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Intel Compiler and OS X Intel by bene » Tue, 2009-10-20 10:20 |
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1,448 |
by smlewis Mon, 2014-04-21 06:47 |
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[dev] quickest way to determine bond distance between polymeric-bonded residues in Pose/Conformation by ipetrik_ambry » Thu, 2018-01-18 12:26 |
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756 |
by rmoretti Tue, 2018-01-30 08:29 |
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Program frozen at "protocols.jobdist.JobDistributors: (0) Master Node -- Waiting for job request; tag_ = 1" by Xinhang » Sat, 2020-04-11 14:30 |
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230 |
by vmulligan Sat, 2020-04-11 17:40 |
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MPI nodes hanging and output log incomplete by yuvals » Wed, 2014-06-18 05:40 |
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4,260 |
by yuvals Sat, 2014-06-21 02:17 |
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Changing Monte Carlo temperature for relax by jruhym » Thu, 2012-02-02 15:18 |
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1,608 |
by rmoretti Mon, 2014-04-21 06:47 |
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How to import SymmDock models into Rosetta for local docking and energy minimization by devroop » Fri, 2012-07-20 13:20 |
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2,245 |
by smlewis Mon, 2014-04-21 06:47 |
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How to modify disulfide bonds constrain in homology modeling by eunwook » Mon, 2013-05-13 04:56 |
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1,860 |
by smlewis Mon, 2014-04-21 06:47 |
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score function for centroid mode by MarkW » Thu, 2015-02-26 08:56 |
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1,423 |
by jadolfbr Fri, 2015-02-27 11:08 |
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Generating Protein/NA decoys by rbeier1 » Mon, 2016-01-11 03:25 |
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1,231 |
by rmoretti Thu, 2016-04-28 16:25 |
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Icouldnot find DDMI protocol for design protein by ladimafakher » Mon, 2018-02-12 09:22 |
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589 |
by rmoretti Mon, 2018-02-12 09:39 |
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could restta consider the flexibility of backbone duirng protein docking? by albumns » Wed, 2010-11-24 01:00 |
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1,682 |
by smlewis Mon, 2014-04-21 06:47 |
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The algorithm of adding missing Hydrogen to a backbone by ac.research » Tue, 2018-03-06 03:48 |
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801 |
by rmoretti Sat, 2018-03-17 10:43 |
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meaning of the clustering the output files by phanvy » Tue, 2014-06-24 07:11 |
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1,143 |
by rmoretti Tue, 2014-07-01 12:07 |
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scoring function changed from 2.3? by jarod » Mon, 2010-04-12 18:56 |
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1,116 |
by smlewis Mon, 2014-04-21 06:47 |
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Remodel introduces clashes when stitching by achambe » Thu, 2016-08-25 17:51 |
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874 |
by possu Tue, 2016-08-30 16:57 |
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MET, MSE, and fMET Amino Acids by ac.research » Sat, 2017-11-18 06:33 |
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1,421 |
by smlewis Sun, 2017-11-19 20:08 |
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mpi + mp_mutate_relax by decrSTL » Thu, 2020-01-16 10:47 |
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291 |
by jkleman Thu, 2020-01-16 11:05 |
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new installation on local computer problem by lqzhang » Mon, 2010-02-01 08:41 |
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1,157 |
by smlewis Mon, 2014-04-21 06:47 |
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Generating Fragment Libraries for Metal Binding Proteins by buzb » Wed, 2011-01-26 12:43 |
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1,978 |
by kaue Mon, 2014-04-21 06:47 |
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How to set the enviroment variable $ROSETTA3, $ $ROSETTA3_DB, $ROSETTA_TOOLS? by Sunyp_IM » Thu, 2017-07-27 01:07 |
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1,997 |
by SenyorDrew Sat, 2017-07-29 09:59 |
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Will Rosetta Flexpepdock be adequate for this for now.? by monos_morpheus » Wed, 2011-04-27 19:10 |
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1,713 |
by londonir Mon, 2014-04-21 06:47 |
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Comparative modelling of dimer by rt1108 » Fri, 2012-06-15 07:31 |
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1,885 |
by smlewis Mon, 2014-04-21 06:47 |
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Design on NMR template by enoee » Wed, 2010-07-21 05:29 |
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1,127 |
by smlewis Mon, 2014-04-21 06:47 |
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hbnet by mintseris » Mon, 2018-03-19 09:02 |
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643 |
by rmoretti Mon, 2018-03-19 09:08 |
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str::out_of_range with mpiexec and relax by pedro.guillem » Fri, 2020-06-19 10:39 |
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179 |
by pedro.guillem Wed, 2020-06-24 04:49 |
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RASREC full_run vs. test_run by Lati » Wed, 2015-10-28 03:26 |
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1,222 |
by Lati Fri, 2015-11-20 03:32 |
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Incorporating Rosetta Binary and Database to a Web Server Pipeline by smkim » Fri, 2018-09-28 20:35 |
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775 |
by rmoretti Fri, 2018-11-09 12:22 |
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Error in src/protocols/membrane/util.cc line: 1224 by renedominik » Tue, 2020-02-11 08:10 |
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297 |
by renedominik Wed, 2020-02-12 06:16 |
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Performance improvement in AbinitioRelax and relax 3.2 ??? by smg3d » Sun, 2011-02-06 08:59 |
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1,430 |
by smlewis Mon, 2014-04-21 06:47 |
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python problem? by albumns » Fri, 2012-03-02 11:03 |
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1,333 |
by albumns Mon, 2014-04-21 06:47 |
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Issues running the Matcher in 3.4 and 3.5 by Jhreed » Tue, 2015-05-26 11:38 |
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1,172 |
by rmoretti Wed, 2015-06-17 12:43 |
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How to read the output score file from rosetta? by Sunyp_IM » Sun, 2017-08-27 05:29 |
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1,324 |
by rmoretti Mon, 2017-08-28 09:32 |
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Questions regarding fragmentation using Robetta by ahmadkhalifa » Thu, 2018-06-28 13:24 |
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572 |
by smlewis Thu, 2018-06-28 13:34 |
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no template pdb provided for alignment by HZHANG020 » Sat, 2014-06-14 06:27 |
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1,537 |
by rmoretti Mon, 2014-06-16 08:23 |
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about the option -constraints:cst_fa_file & -constraints:cst_fa_weight by jiongzhang » Sat, 2010-12-25 12:55 |
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2,183 |
by smlewis Mon, 2014-04-21 06:47 |
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How to use Rosetta Position constraint docking? by libai2098 » Mon, 2011-05-09 01:08 |
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1,486 |
by libai2098 Mon, 2014-04-21 06:47 |
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ddG average energy by dave » Wed, 2013-04-03 03:36 |
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1,576 |
by rmoretti Mon, 2014-04-21 06:47 |
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Can rosetta model cyclic peptide? by Apiwat » Fri, 2014-02-07 02:08 |
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1,468 |
by rmoretti Tue, 2014-02-11 06:24 |
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Error running GenericMonteCarlo mover within MultipleOutputWrapper mover by abhi_pe_acharya » Mon, 2018-04-16 04:58 |
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909 |
by abhi_pe_acharya Thu, 2018-04-19 03:49 |
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How to determine the value size in block of *.cst files? by weifulei » Sun, 2019-05-05 19:56 |
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436 |
by rmoretti Tue, 2019-07-09 15:48 |
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Installing on windows using MinGW by abdullah_ahmed » Wed, 2010-09-15 08:45 |
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1,176 |
by smlewis Mon, 2014-04-21 06:47 |
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Re: Basic python scripts for File Manipulation by bharat_46010 » Mon, 2011-03-14 19:44 |
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2,429 |
by smlewis Mon, 2014-04-21 06:47 |
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Partial homology modeling in Rosetta by al614 » Mon, 2016-10-31 12:30 |
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1,111 |
by rmoretti Mon, 2016-11-14 15:12 |
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Fixing certain residues during refinement by ckdenist » Thu, 2019-08-29 14:00 |
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408 |
by jadolfbr Thu, 2019-08-29 14:29 |
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Protein-Protein Docking by hwillis » Fri, 2009-08-07 01:31 |
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1,591 |
by smlewis Mon, 2014-04-21 06:47 |
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why not scoring function in loop model? by albumns » Thu, 2011-01-06 00:13 |
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1,452 |
by smlewis Mon, 2014-04-21 06:47 |
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mcm for Docking in Rosetta3.1 by dyq » Tue, 2010-01-12 13:44 |
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1,401 |
by smlewis Mon, 2014-04-21 06:47 |
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Error during docking with proteins containing norleucine by aaj » Mon, 2016-04-25 15:04 |
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842 |
by rmoretti Thu, 2016-04-28 14:47 |
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Divide larger low-res. global run into several smaller runs? by jasnyderjr » Mon, 2015-12-21 17:41 |
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1,045 |
by smlewis Tue, 2015-12-22 08:31 |
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ERROR: FragmentIO: could not open file by ahmadkhalifa » Wed, 2018-01-31 13:30 |
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908 |
by rmoretti Wed, 2018-01-31 14:57 |
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Docking failure by khanhbinh » Sun, 2012-09-23 22:19 |
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1,770 |
by khanhbinh Mon, 2014-04-21 06:47 |
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Multi-chain Modelling by Sandy » Sun, 2015-08-09 14:41 |
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2,404 |
by rmoretti Tue, 2015-09-08 10:18 |
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Performace Benchmarking by Tushar Kush » Wed, 2019-12-04 02:50 |
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421 |
by smlewis Wed, 2019-12-04 13:07 |
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Why I have the different result with the same initial condition? by mikelin » Sat, 2011-06-04 11:35 |
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2,842 |
by JeffreyGray Mon, 2014-04-21 06:47 |
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How to generate score file for loop refinement or modelling? by zhisheng » Fri, 2011-12-09 05:15 |
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2,061 |
by zhisheng Mon, 2014-04-21 06:47 |
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hydroxyproline patching problem by aaj » Mon, 2016-02-22 07:33 |
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1,576 |
by aaj Mon, 2016-02-29 04:45 |
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What is the best way to make a residue-specific SASA constraint? by jmaly » Thu, 2020-01-23 16:40 |
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389 |
by matteoferla Wed, 2020-01-29 12:18 |
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Design with non-canonical amino acids (NCAA) by yinasun » Mon, 2019-08-05 00:34 |
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573 |
by matteoferla Thu, 2019-08-22 05:39 |
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RosettaRemodel gives no increased output when setting higher -num_trajectory by JW_24 » Tue, 2020-09-22 11:49 |
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66 |
by JW_24 Wed, 2020-09-23 01:27 |
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Noncanonical amino acid HIP by Victor » Fri, 2014-01-31 07:45 |
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2,354 |
by Victor Fri, 2014-01-31 10:41 |
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backbone-independent density by SergeyP » Sun, 2016-03-20 04:57 |
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1,286 |
by SergeyP Thu, 2016-05-05 02:07 |
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build parallel version of Rosetta by atfrank » Tue, 2009-10-06 22:33 |
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2,366 |
by smlewis Mon, 2014-04-21 06:47 |
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Fix missing backbone residues by Matthys » Mon, 2010-05-03 09:03 |
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2,326 |
by Matthys Mon, 2014-04-21 06:47 |
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possible idealize app bug - residues being deleted by jtmacd » Mon, 2009-06-08 06:27 |
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1,463 |
by jtmacd Mon, 2014-04-21 06:47 |
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redesign a enzyme by fixing the active site by Lindsay » Wed, 2012-03-07 08:23 |
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1,857 |
by Lindsay Mon, 2014-04-21 06:47 |
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Rosetta3.5 src/core/pack/dunbrack/RotamerLibrary.cc permission problem by ytao » Fri, 2013-06-28 12:13 |
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2,217 |
by ytao Mon, 2014-04-21 06:48 |
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a question about protein-ligand docking in generating 1SW2 conformers by Ryhon Wang » Wed, 2014-05-28 22:27 |
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2,109 |
by rmoretti Tue, 2014-06-03 11:45 |
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AtomPair and SPLINE by attesor » Sat, 2015-06-20 11:42 |
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2,056 |
by attesor Thu, 2015-10-22 03:42 |
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Histidine phosphorylation by a patch by felipet » Sat, 2016-07-09 06:51 |
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1,617 |
by felipet Sat, 2016-07-09 09:50 |
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protein surface design by tatsiana.bylund » Sun, 2019-09-15 03:44 |
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464 |
by dfcoelho Tue, 2019-11-19 10:16 |
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Negative design: Can a filter call a mover in rosetta scripts? by jgans » Sat, 2012-09-08 21:28 |
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2,242 |
by rmoretti Mon, 2014-04-21 06:47 |
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restricting space in a design by ast » Tue, 2012-01-17 06:31 |
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1,583 |
by rmoretti Mon, 2014-04-21 06:47 |
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Number of conformations needed by JadAbbass » Sun, 2014-02-16 13:21 |
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1,434 |
by JadAbbass Tue, 2014-02-18 07:27 |
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Problem with ClashCountCalculator by masterofpuppets » Wed, 2015-01-07 04:47 |
2 |
1,535 |
by rmoretti Fri, 2015-01-09 10:59 |
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disulfide bridges in loop modeling by pledor » Fri, 2010-08-06 06:49 |
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1,936 |
by pledor Mon, 2014-04-21 06:47 |
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How to specify residue numbers in a resfile for a batch of pdbs, while some of them have missing residue numbers? by johnnytam100 » Wed, 2019-05-08 02:30 |
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588 |
by johnnytam100 Wed, 2019-05-15 18:45 |
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Bug in Loop Modeling by dseelig » Thu, 2010-09-23 05:55 |
2 |
1,600 |
by smlewis Mon, 2014-04-21 06:47 |
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Selecting Top Scoring Decoys by kalabharath » Thu, 2011-10-20 22:08 |
2 |
1,727 |
by rmoretti Mon, 2014-04-21 06:47 |
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Fold tree error by mansi » Tue, 2010-05-18 07:43 |
2 |
2,567 |
by mansi Mon, 2014-04-21 06:47 |
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Why I_sc of Rosetta 2016.02 and 2018.21 are so different? by eminegenetics » Mon, 2018-07-16 12:51 |
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906 |
by eminegenetics Wed, 2018-07-18 13:48 |
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How to recover out files when run crashs by samuelrpita » Tue, 2015-07-28 12:54 |
2 |
1,677 |
by samuelrpita Thu, 2015-08-06 14:23 |
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Rosetta releases and revision numbers by ShaneOConnor » Thu, 2011-11-17 13:55 |
2 |
3,187 |
by smlewis Mon, 2014-04-21 06:47 |
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fixbb and HETATM by doranhen » Mon, 2013-01-14 07:50 |
2 |
2,133 |
by doranhen Mon, 2014-04-21 06:47 |
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perturb_temp flag by Loki01 » Tue, 2018-11-27 05:06 |
2 |
597 |
by rmoretti Wed, 2019-04-03 09:58 |
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RestrictToRepackingRLT and PreventRepackingRLT by coomteng@gmail.com » Mon, 2018-03-05 11:19 |
2 |
919 |
by coomteng@gmail.com Tue, 2018-03-06 02:31 |
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Basic help with Protein-DNA and Protein-Protein modeling and engineering by Robert Evans » Sat, 2013-08-17 12:21 |
2 |
2,425 |
by Robert Evans Mon, 2014-04-21 06:48 |
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Installing Rosetta Abinitio make_fragments.pl by ctaylor » Thu, 2009-09-17 09:20 |
2 |
1,963 |
by ctaylor Mon, 2014-04-21 06:47 |
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Can't read constraint type by allan.ferrari » Fri, 2015-08-28 12:33 |
2 |
1,463 |
by allan.ferrari Mon, 2015-09-21 21:54 |
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