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Rosetta 3 - General
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how to docking including HETATM by tricia » Tue, 2009-05-05 22:03 |
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1,626 |
by smlewis Mon, 2014-04-21 06:47 |
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Generating Protein/NA decoys by rbeier1 » Mon, 2016-01-11 03:25 |
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1,352 |
by rmoretti Thu, 2016-04-28 16:25 |
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Icouldnot find DDMI protocol for design protein by ladimafakher » Mon, 2018-02-12 09:22 |
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706 |
by rmoretti Mon, 2018-02-12 09:39 |
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Read svn acces or acces to developmen version of rosetta by knutjbj » Thu, 2010-12-09 17:06 |
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1,703 |
by smlewis Mon, 2014-04-21 06:47 |
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MPI nodes hanging and output log incomplete by yuvals » Wed, 2014-06-18 05:40 |
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4,444 |
by yuvals Sat, 2014-06-21 02:17 |
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Problem with run_lips.pl script by wdyrka » Tue, 2010-09-07 11:07 |
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1,522 |
by smlewis Mon, 2014-04-21 06:47 |
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Compilation error by zgcarvalho » Fri, 2010-02-12 06:58 |
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1,251 |
by smlewis Mon, 2014-04-21 06:47 |
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Citing Rosetta3.0 by ctaylor » Fri, 2009-10-09 11:42 |
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3,482 |
by smlewis Mon, 2014-04-21 06:47 |
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How to set the enviroment variable $ROSETTA3, $ $ROSETTA3_DB, $ROSETTA_TOOLS? by Sunyp_IM » Thu, 2017-07-27 01:07 |
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2,227 |
by SenyorDrew Sat, 2017-07-29 09:59 |
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error running rosetta3.0 by aschoenr » Wed, 2009-06-10 13:57 |
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1,811 |
by jtmacd Mon, 2014-04-21 06:47 |
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The algorithm of adding missing Hydrogen to a backbone by ac.research » Tue, 2018-03-06 03:48 |
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959 |
by rmoretti Sat, 2018-03-17 10:43 |
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meaning of the clustering the output files by phanvy » Tue, 2014-06-24 07:11 |
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1,236 |
by rmoretti Tue, 2014-07-01 12:07 |
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Remodel introduces clashes when stitching by achambe » Thu, 2016-08-25 17:51 |
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959 |
by possu Tue, 2016-08-30 16:57 |
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MET, MSE, and fMET Amino Acids by ac.research » Sat, 2017-11-18 06:33 |
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1,607 |
by smlewis Sun, 2017-11-19 20:08 |
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mpi + mp_mutate_relax by decrSTL » Thu, 2020-01-16 10:47 |
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456 |
by jkleman Thu, 2020-01-16 11:05 |
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where do new .params files go? by einew » Wed, 2011-01-05 12:09 |
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1,678 |
by smlewis Mon, 2014-04-21 06:47 |
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how to do ensemble docking using rosetta3.1 by lqzhang » Mon, 2010-01-11 10:31 |
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1,282 |
by sid Mon, 2014-04-21 06:47 |
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RASREC full_run vs. test_run by Lati » Wed, 2015-10-28 03:26 |
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1,315 |
by Lati Fri, 2015-11-20 03:32 |
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Incorporating Rosetta Binary and Database to a Web Server Pipeline by smkim » Fri, 2018-09-28 20:35 |
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899 |
by rmoretti Fri, 2018-11-09 12:22 |
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Error in src/protocols/membrane/util.cc line: 1224 by renedominik » Tue, 2020-02-11 08:10 |
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464 |
by renedominik Wed, 2020-02-12 06:16 |
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python problem? by albumns » Fri, 2012-03-02 11:03 |
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1,421 |
by albumns Mon, 2014-04-21 06:47 |
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Issues running the Matcher in 3.4 and 3.5 by Jhreed » Tue, 2015-05-26 11:38 |
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1,283 |
by rmoretti Wed, 2015-06-17 12:43 |
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How to read the output score file from rosetta? by Sunyp_IM » Sun, 2017-08-27 05:29 |
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1,464 |
by rmoretti Mon, 2017-08-28 09:32 |
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Questions regarding fragmentation using Robetta by ahmadkhalifa » Thu, 2018-06-28 13:24 |
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664 |
by smlewis Thu, 2018-06-28 13:34 |
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Will Rosetta Flexpepdock be adequate for this for now.? by monos_morpheus » Wed, 2011-04-27 19:10 |
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1,793 |
by londonir Mon, 2014-04-21 06:47 |
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Comparative modelling of dimer by rt1108 » Fri, 2012-06-15 07:31 |
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1,968 |
by smlewis Mon, 2014-04-21 06:47 |
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hbnet by mintseris » Mon, 2018-03-19 09:02 |
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729 |
by rmoretti Mon, 2018-03-19 09:08 |
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str::out_of_range with mpiexec and relax by pedro.guillem » Fri, 2020-06-19 10:39 |
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383 |
by pedro.guillem Wed, 2020-06-24 04:49 |
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How to determine the value size in block of *.cst files? by weifulei » Sun, 2019-05-05 19:56 |
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563 |
by rmoretti Tue, 2019-07-09 15:48 |
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Re: Basic python scripts for File Manipulation by bharat_46010 » Mon, 2011-03-14 19:44 |
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2,511 |
by smlewis Mon, 2014-04-21 06:47 |
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Partial homology modeling in Rosetta by al614 » Mon, 2016-10-31 12:30 |
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1,205 |
by rmoretti Mon, 2016-11-14 15:12 |
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What is the different between dun08 and default dunbrack library? by SunH » Mon, 2010-11-08 06:14 |
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1,637 |
by smlewis Mon, 2014-04-21 06:47 |
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max_nn by anusmita_sahoo » Thu, 2010-03-11 02:21 |
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1,224 |
by smlewis Mon, 2014-04-21 06:47 |
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Error in RMSD calculation when native sequence deviates by abdullah » Tue, 2009-11-10 08:56 |
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1,749 |
by smlewis Mon, 2014-04-21 06:47 |
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Fixing certain residues during refinement by ckdenist » Thu, 2019-08-29 14:00 |
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563 |
by jadolfbr Thu, 2019-08-29 14:29 |
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no template pdb provided for alignment by HZHANG020 » Sat, 2014-06-14 06:27 |
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1,646 |
by rmoretti Mon, 2014-06-16 08:23 |
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Problems in installing Rosetta3 in Red Hat Linux by jjz2009 » Mon, 2009-08-24 19:16 |
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1,353 |
by smlewis Mon, 2014-04-21 06:47 |
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Loop Insertion/Extension using rosetta suite by bharat_46010 » Mon, 2011-02-28 04:45 |
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1,349 |
by smlewis Mon, 2014-04-21 06:47 |
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How to use Rosetta Position constraint docking? by libai2098 » Mon, 2011-05-09 01:08 |
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1,558 |
by libai2098 Mon, 2014-04-21 06:47 |
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ddG average energy by dave » Wed, 2013-04-03 03:36 |
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1,668 |
by rmoretti Mon, 2014-04-21 06:47 |
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Can rosetta model cyclic peptide? by Apiwat » Fri, 2014-02-07 02:08 |
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1,577 |
by rmoretti Tue, 2014-02-11 06:24 |
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Error running GenericMonteCarlo mover within MultipleOutputWrapper mover by abhi_pe_acharya » Mon, 2018-04-16 04:58 |
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1,045 |
by abhi_pe_acharya Thu, 2018-04-19 03:49 |
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Error during docking with proteins containing norleucine by aaj » Mon, 2016-04-25 15:04 |
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938 |
by rmoretti Thu, 2016-04-28 14:47 |
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Divide larger low-res. global run into several smaller runs? by jasnyderjr » Mon, 2015-12-21 17:41 |
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1,141 |
by smlewis Tue, 2015-12-22 08:31 |
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ERROR: FragmentIO: could not open file by ahmadkhalifa » Wed, 2018-01-31 13:30 |
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1,083 |
by rmoretti Wed, 2018-01-31 14:57 |
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question about protein docking results by albumns » Thu, 2010-11-25 08:19 |
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1,511 |
by smlewis Mon, 2014-04-21 06:47 |
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new installation on local computer problem by lqzhang » Mon, 2010-02-01 08:41 |
1 |
1,220 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta 3.1 seg faults gcc while compiling on Fedora 11 by jtmacd » Fri, 2009-10-02 05:26 |
1 |
1,426 |
by smlewis Mon, 2014-04-21 06:47 |
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RosettaDesign Server, reproducing optimized interface conformation by AlexanderMetz » Thu, 2012-02-09 10:41 |
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2,472 |
by smlewis Mon, 2014-04-21 06:47 |
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How to insert a TER line between docking partners by devroop » Sun, 2012-07-29 13:48 |
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2,354 |
by smlewis Mon, 2014-04-21 06:47 |
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Custom fold tree by lah435 » Tue, 2015-03-03 12:02 |
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1,189 |
by rmoretti Mon, 2015-03-30 16:38 |
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ssDNA (aptamer)/protein docking by JulienO » Fri, 2016-05-27 02:25 |
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1,325 |
by rmoretti Tue, 2016-07-12 08:47 |
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Docking a ligand to two movable domains of a protein by brspurri » Wed, 2018-05-16 08:27 |
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691 |
by rmoretti Thu, 2018-06-28 14:22 |
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MakeRotLib by yinasun » Fri, 2019-07-26 02:20 |
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551 |
by rmoretti Mon, 2019-08-26 15:01 |
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Bug in cluster? by nitroamos » Mon, 2011-11-21 12:53 |
1 |
1,495 |
by smlewis Mon, 2014-04-21 06:47 |
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Get nchi for heavy atoms by pachecoj » Tue, 2014-11-04 19:04 |
1 |
1,298 |
by rmoretti Tue, 2014-11-11 13:22 |
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Error message: ArchiveManager spinning down by Lati » Sun, 2016-01-24 02:42 |
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1,473 |
by smlewis Sun, 2016-01-24 03:24 |
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Robetta nstruct number by ac.research » Tue, 2017-01-31 14:27 |
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952 |
by rmoretti Thu, 2017-02-02 08:52 |
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scoring function changed from 2.3? by jarod » Mon, 2010-04-12 18:56 |
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1,195 |
by smlewis Mon, 2014-04-21 06:47 |
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Parallel Installation of ROSETTA3.1 by anirbanzz » Mon, 2009-12-07 21:09 |
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1,369 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta Holes and Packstat scoring by nick.polizzi » Fri, 2013-08-02 09:06 |
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2,660 |
by rmoretti Mon, 2014-04-21 06:48 |
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Cluster decoys after running PlexPepDock by phanvy » Thu, 2014-06-19 06:03 |
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1,383 |
by nawsad Fri, 2014-06-20 02:48 |
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Difficulties with Protein Docking using Harmonic Restraints by Parker.deWaal » Fri, 2016-08-19 11:23 |
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980 |
by smlewis Mon, 2016-08-22 10:39 |
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Possible documentation error by imurch » Tue, 2012-04-17 00:11 |
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1,638 |
by Anonymous Mon, 2014-04-21 06:47 |
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rosettautil module not imported cleanly by python scripts by franfdez » Tue, 2013-08-27 01:25 |
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2,062 |
by rmoretti Mon, 2014-04-21 06:48 |
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Evaluate Docking Result by byin » Thu, 2014-07-03 11:31 |
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1,702 |
by rmoretti Wed, 2014-07-16 08:07 |
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known disulfides in Remodel sequence by matteoferla » Mon, 2018-09-10 06:43 |
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805 |
by matteoferla Thu, 2018-09-13 06:21 |
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replace a short helix by berk » Wed, 2013-06-05 10:19 |
1 |
1,220 |
by rmoretti Mon, 2014-04-21 06:48 |
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Docking with glutathione by phanvy » Wed, 2015-04-29 22:25 |
1 |
1,207 |
by rmoretti Thu, 2015-04-30 07:13 |
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Enumeration of Amino Acid identities by achambe » Wed, 2016-06-15 15:28 |
1 |
1,023 |
by rmoretti Wed, 2016-06-15 16:06 |
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energy units by jtmacd » Mon, 2009-07-06 10:39 |
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2,792 |
by smlewis Mon, 2014-04-21 06:47 |
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Design on NMR template by enoee » Wed, 2010-07-21 05:29 |
1 |
1,198 |
by smlewis Mon, 2014-04-21 06:47 |
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ab initio folding part of a protein by attesor » Wed, 2013-03-06 04:39 |
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1,424 |
by smlewis Mon, 2014-04-21 06:47 |
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rosetta nonlocal application by mintseris » Tue, 2013-12-31 13:13 |
1 |
1,484 |
by rmoretti Mon, 2014-04-21 06:48 |
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Looking for collaboration. by ac.research » Mon, 2017-03-06 04:54 |
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900 |
by rmoretti Mon, 2017-03-06 08:37 |
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Denovo prediction from multiple fragment lengths by ahmadkhalifa » Sun, 2019-03-24 03:55 |
1 |
536 |
by rmoretti Sat, 2019-03-30 12:10 |
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generating 10 lowest energy structures from abinitio by isengupta13 » Fri, 2010-05-07 11:44 |
2 |
1,567 |
by ndousis Mon, 2014-04-21 06:47 |
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error running rosetta3.1 demos by lvtun » Thu, 2010-10-21 20:43 |
2 |
1,865 |
by lvtun Mon, 2014-04-21 06:47 |
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runtime error by exchhattu » Wed, 2010-03-03 02:54 |
2 |
1,540 |
by exchhattu Mon, 2014-04-21 06:47 |
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redesign a enzyme by fixing the active site by Lindsay » Wed, 2012-03-07 08:23 |
2 |
2,000 |
by Lindsay Mon, 2014-04-21 06:47 |
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Rosetta3.5 src/core/pack/dunbrack/RotamerLibrary.cc permission problem by ytao » Fri, 2013-06-28 12:13 |
2 |
2,349 |
by ytao Mon, 2014-04-21 06:48 |
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a question about protein-ligand docking in generating 1SW2 conformers by Ryhon Wang » Wed, 2014-05-28 22:27 |
2 |
2,277 |
by rmoretti Tue, 2014-06-03 11:45 |
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AtomPair and SPLINE by attesor » Sat, 2015-06-20 11:42 |
2 |
2,269 |
by attesor Thu, 2015-10-22 03:42 |
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Histidine phosphorylation by a patch by felipet » Sat, 2016-07-09 06:51 |
2 |
1,758 |
by felipet Sat, 2016-07-09 09:50 |
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Noncanonical amino acid HIP by Victor » Fri, 2014-01-31 07:45 |
2 |
2,560 |
by Victor Fri, 2014-01-31 10:41 |
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backbone-independent density by SergeyP » Sun, 2016-03-20 04:57 |
2 |
1,423 |
by SergeyP Thu, 2016-05-05 02:07 |
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restricting space in a design by ast » Tue, 2012-01-17 06:31 |
2 |
1,695 |
by rmoretti Mon, 2014-04-21 06:47 |
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Number of conformations needed by JadAbbass » Sun, 2014-02-16 13:21 |
2 |
1,566 |
by JadAbbass Tue, 2014-02-18 07:27 |
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Problem with ClashCountCalculator by masterofpuppets » Wed, 2015-01-07 04:47 |
2 |
1,665 |
by rmoretti Fri, 2015-01-09 10:59 |
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How to specify residue numbers in a resfile for a batch of pdbs, while some of them have missing residue numbers? by johnnytam100 » Wed, 2019-05-08 02:30 |
2 |
731 |
by johnnytam100 Wed, 2019-05-15 18:45 |
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rosetta run error by isengupta13 » Thu, 2010-06-03 19:00 |
2 |
1,671 |
by aminzia Fri, 2019-07-26 13:14 |
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Selecting Top Scoring Decoys by kalabharath » Thu, 2011-10-20 22:08 |
2 |
1,872 |
by rmoretti Mon, 2014-04-21 06:47 |
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Why I_sc of Rosetta 2016.02 and 2018.21 are so different? by eminegenetics » Mon, 2018-07-16 12:51 |
2 |
1,076 |
by eminegenetics Wed, 2018-07-18 13:48 |
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protein surface design by tatsiana.bylund » Sun, 2019-09-15 03:44 |
2 |
637 |
by dfcoelho Tue, 2019-11-19 10:16 |
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Negative design: Can a filter call a mover in rosetta scripts? by jgans » Sat, 2012-09-08 21:28 |
2 |
2,387 |
by rmoretti Mon, 2014-04-21 06:47 |
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Intermediate file insertion by exchhattu » Wed, 2009-09-02 18:44 |
2 |
1,550 |
by exchhattu Mon, 2014-04-21 06:47 |
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How do I add virtual atom to my cofactor (metal ion) in rosettadock? by monos_morpheus » Sat, 2011-02-05 21:24 |
2 |
2,118 |
by monos_morpheus Mon, 2014-04-21 06:47 |
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Rosetta releases and revision numbers by ShaneOConnor » Thu, 2011-11-17 13:55 |
2 |
3,355 |
by smlewis Mon, 2014-04-21 06:47 |
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fixbb and HETATM by doranhen » Mon, 2013-01-14 07:50 |
2 |
2,273 |
by doranhen Mon, 2014-04-21 06:47 |
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perturb_temp flag by Loki01 » Tue, 2018-11-27 05:06 |
2 |
745 |
by rmoretti Wed, 2019-04-03 09:58 |
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