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How to run PLOT LHOC on Results from Rosie Server by sujigeorge1979 » Mon, 2019-06-10 19:32 |
3 |
3,059 |
by jeliazkov Mon, 2019-06-24 11:49 |
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I have jobs queued for nearly 1 month by jessye » Thu, 2019-10-10 03:36 |
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1,370 |
by jessye Thu, 2019-10-10 03:36 |
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Is there a limitation of RNA length using farfar2? by lwb » Wed, 2023-01-04 19:09 |
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605 |
by everyday847 Wed, 2023-01-04 19:20 |
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Job 「№15623」has failed by fglaser » Tue, 2015-07-07 00:17 |
3 |
5,445 |
by rmoretti Tue, 2015-07-14 14:35 |
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Let docking2 jobs list the scores for the input proteins.pdb file by AdoCbl » Wed, 2015-09-23 12:24 |
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2,726 |
by AdoCbl Thu, 2015-09-24 11:38 |
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LIGAND APPEARS TO BE DOCKED INTO EMPTY SPACE by gabeliluo1 » Wed, 2016-01-06 16:23 |
5 |
6,690 |
by rmoretti Thu, 2016-02-04 07:39 |
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Ligand Binding by KS Siddiqui » Thu, 2019-04-25 01:01 |
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1,315 |
by KS Siddiqui Thu, 2019-04-25 01:01 |
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Ligand docking error Could not find essential file trigger-00001.ligand_docking_protocol by iphan » Mon, 2016-09-12 10:58 |
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5,697 |
by rmoretti Mon, 2016-10-03 10:44 |
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Ligand Docking Protocol now available for academic users by Sergey » Sat, 2014-05-10 14:39 |
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2,304 |
by Sergey Sat, 2014-05-10 14:39 |
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Ligand docking score.sc file containing more structures than produced by Delfosse57 » Sat, 2022-07-16 10:44 |
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846 |
by Delfosse57 Mon, 2022-07-18 11:09 |
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Linear peptide versus cyclic peptide binding prediction by gabr » Mon, 2019-11-18 12:25 |
2 |
3,043 |
by gabr Tue, 2019-11-19 13:57 |
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Log in to rosie by dnamkr » Tue, 2022-03-15 11:04 |
1 |
830 |
by Sergey Tue, 2022-03-15 11:28 |
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Login using GitHub by nicotomasini » Mon, 2023-01-30 09:14 |
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520 |
by Sergey Mon, 2023-01-30 12:32 |
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m6A modification on FARFAR2 by uke » Mon, 2023-09-18 04:31 |
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352 |
by uke Mon, 2023-09-18 04:31 |
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missing residues while Rosie Modeling by jguan » Mon, 2014-08-11 06:56 |
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4,331 |
by jadolfbr Tue, 2014-10-21 08:46 |
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Modeling Antibody Structure failed by Sunyp_IM » Sun, 2017-08-06 02:59 |
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2,443 |
by rmoretti Mon, 2017-08-14 15:09 |
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Multiple antibody jobs failed by larae » Mon, 2022-09-12 09:54 |
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420 |
by larae Mon, 2022-09-12 09:54 |
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My academic institution domain is not listed. by mebigi » Fri, 2022-04-08 07:44 |
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941 |
by mebigi Mon, 2022-04-11 16:35 |
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my status jobs been queued in such longer time by Atirah » Fri, 2020-04-10 02:55 |
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1,500 |
by Atirah Fri, 2020-04-10 02:57 |
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Nanobody prediction using ROSIE ? by esozdemir » Thu, 2019-06-20 11:14 |
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2,012 |
by rmoretti Mon, 2019-06-24 12:02 |
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Numbering failed by Sbrendle » Mon, 2017-06-05 08:07 |
3 |
4,112 |
by rmoretti Thu, 2017-06-29 07:58 |
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Output format by Michele Tavanti » Sat, 2015-04-25 05:03 |
2 |
3,665 |
by Conan Sat, 2015-04-25 11:31 |
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peptide design by Miriam Gulman » Wed, 2023-10-25 00:09 |
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220 |
by rmoretti Mon, 2023-10-30 07:21 |
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peptiderive problem by Fatemeh Arabi » Fri, 2016-10-14 02:54 |
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4,114 |
by Sergey Mon, 2016-11-14 14:48 |
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pKa app is now public! by Sergey » Mon, 2014-03-10 15:47 |
0 |
3,730 |
by Sergey Mon, 2014-03-10 15:47 |
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pKa job submitting problem by syoifczeri » Tue, 2015-02-17 21:41 |
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3,830 |
by syoifczeri Wed, 2015-02-18 19:15 |
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Prepack step fail in docking2 by gretahultqvist » Thu, 2015-06-11 00:20 |
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3,102 |
by rmoretti Fri, 2015-07-03 12:14 |
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problem in downloading result from backrub server by ladimafakher » Sun, 2018-07-01 00:50 |
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1,323 |
by ladimafakher Sun, 2018-07-01 00:50 |
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Problem in refinement job in Docking2 by aninditaseal » Fri, 2016-04-22 07:12 |
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2,456 |
by Sergey Fri, 2016-04-22 11:13 |
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Problem with ROSIE antibody modeling by wildchipiron » Thu, 2016-04-14 20:00 |
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1,840 |
by wildchipiron Thu, 2016-04-14 20:00 |
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problems with docking by msironi » Thu, 2016-10-27 00:46 |
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4,127 |
by Sergey Mon, 2016-11-21 11:03 |
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Problems with the RNA Denovo server by mariaclausen » Tue, 2014-11-25 01:45 |
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3,885 |
by mariaclausen Thu, 2014-11-27 01:30 |
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Protein protein docking by drrahulsuresh » Wed, 2018-05-02 12:52 |
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2,309 |
by smlewis Thu, 2018-05-03 11:45 |
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proteins.pdb: Not enough chains in submitted protein! [At least 2 chains should be present, found chains: [u'A']...] by Loki01 » Mon, 2018-03-19 13:34 |
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2,973 |
by Loki01 Mon, 2018-03-19 13:45 |
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Questions about SnugDock result analysis by LTJ » Thu, 2020-07-02 17:41 |
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1,276 |
by LTJ Thu, 2020-07-02 17:41 |
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Regarding snugdock Ag-Ab score by ss » Mon, 2018-12-10 14:47 |
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6,122 |
by ss Thu, 2019-01-03 09:08 |
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Relax application before ROSIE by mwinn99 » Wed, 2022-05-25 13:23 |
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522 |
by mwinn99 Wed, 2022-05-25 13:23 |
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Results are NOT emailed by alsayeghkn » Wed, 2022-03-23 08:55 |
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489 |
by alsayeghkn Wed, 2022-03-23 08:55 |
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RMSD by jessye » Tue, 2019-07-02 01:54 |
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2,437 |
by rmoretti Tue, 2019-07-09 09:49 |
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RMSD - Score by LT » Thu, 2017-02-23 12:59 |
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2,603 |
by rmoretti Thu, 2017-02-23 13:03 |
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RMSD values for symmetric_docking clockwise vs counterclockwise cyclical outputs by AdoCbl » Sun, 2015-10-18 12:49 |
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2,731 |
by IAndre Mon, 2015-10-19 01:19 |
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RMSD values in docking2 and symmetric_docking runs by AdoCbl » Sun, 2015-08-09 00:48 |
4 |
6,694 |
by rmoretti Fri, 2015-09-04 13:57 |
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Rosetta Antibody by Maryam_tabasinezhad » Sun, 2016-08-28 00:29 |
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2,639 |
by smlewis Sun, 2016-08-28 12:04 |
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ROSETTA design affinity optimization by wentlewi » Mon, 2020-02-03 01:42 |
0 |
1,561 |
by wentlewi Mon, 2020-02-03 01:42 |
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Rosetta processes crashed by izzafajriani » Thu, 2023-02-23 15:35 |
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438 |
by izzafajriani Thu, 2023-02-23 15:35 |
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Rosetta-Vienna RNP-ddG failed by Athena Chu » Mon, 2022-04-18 18:21 |
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512 |
by Athena Chu Mon, 2022-04-18 18:21 |
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Rosettadock Error by jinfeng » Fri, 2022-11-18 20:39 |
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692 |
by jinfeng Fri, 2022-11-18 20:39 |
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RosettaDock output by taeyoungahn » Wed, 2022-11-23 17:04 |
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1,064 |
by taeyoungahn Sun, 2022-11-27 20:12 |
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ROSIE academic email verification by Yang Xie » Fri, 2022-09-23 06:37 |
4 |
995 |
by Yang Xie Fri, 2022-09-23 10:09 |
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ROSIE ANTIBODY GRAFTING by izzafajriani » Sat, 2023-02-25 01:28 |
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432 |
by izzafajriani Sat, 2023-02-25 01:28 |
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ROSIE antibody modeling- discontinuity in backbone by wagnerek » Tue, 2015-10-27 10:18 |
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2,716 |
by rmoretti Wed, 2015-11-25 12:53 |
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Rosie Docking Server-Energy function by jsv » Fri, 2017-07-21 08:26 |
1 |
2,235 |
by ssrb Fri, 2017-07-21 09:29 |
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Rosie GitHub Authentication by ethandsmith » Fri, 2022-12-09 07:38 |
2 |
1,001 |
by ethandsmith Sat, 2022-12-10 07:23 |
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rosie github log in by sperrrinpi » Wed, 2023-04-19 06:16 |
2 |
460 |
by sperrrinpi Thu, 2023-04-20 06:38 |
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Rosie login email verification by dominiksIZI » Tue, 2023-02-21 06:10 |
1 |
442 |
by Sergey Tue, 2023-02-21 09:44 |
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ROSIE pKa calculation issue by lijum » Mon, 2020-06-15 12:12 |
0 |
1,222 |
by lijum Mon, 2020-06-15 12:12 |
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ROSIE Queue not loading by ramon-arg » Mon, 2023-07-31 10:09 |
1 |
232 |
by Sergey Mon, 2023-07-31 11:45 |
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Rosie Server Docking2, wrong plots output? by Conan » Tue, 2015-04-21 12:18 |
6 |
8,489 |
by AdoCbl Sun, 2015-08-09 14:38 |
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Rosie server stuck?? by David Weis » Sun, 2017-03-05 13:37 |
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2,374 |
by smlewis Mon, 2017-03-06 08:58 |
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Rosie vip function fails on multiple tries by Amy F » Sat, 2019-06-15 12:51 |
1 |
1,785 |
by rmoretti Mon, 2019-06-24 12:20 |
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Running ROSIE from terminal by sc19 » Thu, 2022-07-14 01:09 |
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445 |
by sc19 Thu, 2022-07-14 01:09 |
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Score and I_sc in ROSIE symmetric_docking output by AdoCbl » Sun, 2015-08-09 00:26 |
11 |
13,424 |
by rmoretti Tue, 2015-11-24 16:33 |
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Sequence Tolerance broken links? by dnamkr » Fri, 2021-10-22 11:34 |
0 |
701 |
by dnamkr Fri, 2021-10-22 11:34 |
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Sequence Tolerance Failed by Dstork » Tue, 2017-01-03 07:13 |
6 |
6,368 |
by Sergey Mon, 2017-01-09 16:37 |
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sequence_tolerance queue stuck by Fred Muskett » Fri, 2021-09-03 08:08 |
2 |
1,317 |
by line Fri, 2022-02-25 00:40 |
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Small molecule ligand docking in RosettaDock-4.0 by hicks139 » Thu, 2023-03-02 09:35 |
1 |
589 |
by rmoretti Thu, 2023-03-02 09:37 |
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Snugdock by MIke Kent » Mon, 2019-12-16 22:10 |
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4,090 |
by MIke Kent Tue, 2019-12-24 08:02 |
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SNUGDOCK by harsh » Tue, 2018-10-09 23:58 |
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2,108 |
by Sergey Tue, 2018-10-16 15:52 |
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SNUGDOCK by adva » Sun, 2017-07-16 00:46 |
1 |
2,130 |
by rmoretti Mon, 2017-07-17 07:57 |
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Snugdock versus Docking with an ensemble of protein conformations by MIke Kent » Fri, 2019-03-29 10:07 |
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1,940 |
by jeliazkov Fri, 2019-03-29 10:34 |
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SnugDock: chain_id H represents more than one chain by tweetman » Wed, 2018-05-02 04:24 |
1 |
2,562 |
by sheehajh Wed, 2018-05-02 06:38 |
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SnugDocking result interpretation by jessye » Mon, 2019-05-27 03:43 |
1 |
1,882 |
by jeliazkov Tue, 2019-05-28 13:36 |
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Stepwise error by debostuti » Wed, 2021-10-06 08:57 |
2 |
1,176 |
by debostuti Fri, 2021-10-08 00:29 |
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supercharge problems by hooria » Tue, 2016-06-14 05:29 |
2 |
3,479 |
by smlewis Wed, 2016-06-15 07:50 |
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Supercharge server by alva » Wed, 2014-07-02 17:36 |
2 |
4,433 |
by hooria Mon, 2016-06-13 11:08 |
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Support for local install of ROSIE? by jjv5 » Mon, 2022-03-21 08:58 |
1 |
741 |
by Sergey Mon, 2022-03-21 12:10 |
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Symmetric Docking Jobs not running by Flaviyan » Wed, 2014-02-05 06:41 |
2 |
5,959 |
by AdoCbl Sat, 2015-08-08 22:38 |
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Symmetric Docking Protocol by Sergey » Tue, 2013-10-29 17:33 |
0 |
5,551 |
by Sergey Mon, 2014-04-21 06:48 |
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Transitioning from ROSIE to Rosetta by AdoCbl » Wed, 2015-09-23 11:49 |
0 |
1,801 |
by AdoCbl Wed, 2015-09-23 11:49 |
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Verification by davelansing » Wed, 2023-07-05 12:09 |
0 |
196 |
by davelansing Wed, 2023-07-05 12:10 |
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Verification via github by Mirosh » Wed, 2023-08-30 21:15 |
1 |
201 |
by rmoretti Thu, 2023-08-31 08:50 |
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verified academic email address by yang » Wed, 2022-12-07 23:36 |
2 |
1,106 |
by ramezani1991 Sat, 2023-02-04 06:02 |
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Ways to improve both docking2 and symmetric_docking jobs by AdoCbl » Wed, 2015-09-23 14:43 |
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1,845 |
by AdoCbl Wed, 2015-09-23 15:35 |
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Ways to improve ROSIE docking2 jobs by AdoCbl » Wed, 2015-09-23 15:12 |
0 |
1,765 |
by AdoCbl Wed, 2015-09-23 15:12 |
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Ways to improve ROSIE symmetric_docking jobs by AdoCbl » Wed, 2015-09-23 13:39 |
4 |
6,039 |
by IAndre Tue, 2015-09-29 08:10 |
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