Rosetta 3.3
Variables
test::T400_Refinement Namespace Reference

Variables

float kT = 1.0
int n_moves = 10
tuple pose = pose_from_pdb("test/data/test_fragments.pdb")
tuple pose_frag = pose_from_pdb("test/data/test_fragments.pdb")
tuple movemap = MoveMap()
tuple fragset3mer = ConstantLengthFragSet(3, "test/data/test3_fragments")
tuple fragset9mer = ConstantLengthFragSet(9, "test/data/test9_fragments")
tuple mover_3mer = ClassicFragmentMover(fragset3mer,movemap)
tuple scorefxn = create_score_function_ws_patch("standard", "score12")
tuple smallmover = SmallMover(movemap,kT,n_moves)
tuple shearmover = ShearMover(movemap,kT,n_moves)
tuple minmover = MinMover()
tuple mc = MonteCarlo(pose, scorefxn, kT)
tuple ab = ClassicAbinitio(fragset3mer, fragset9mer, movemap)
tuple seqmover = SequenceMover()
tuple trialmover = TrialMover(mover_3mer, mc)

Variable Documentation

Referenced by numeric::proj_angl().

tuple test::T400_Refinement::fragset3mer = ConstantLengthFragSet(3, "test/data/test3_fragments")
tuple test::T400_Refinement::fragset9mer = ConstantLengthFragSet(9, "test/data/test9_fragments")
tuple test::T400_Refinement::mc = MonteCarlo(pose, scorefxn, kT)
tuple test::T400_Refinement::minmover = MinMover()

Referenced by main(), and my_main().

tuple test::T400_Refinement::movemap = MoveMap()
tuple test::T400_Refinement::mover_3mer = ClassicFragmentMover(fragset3mer,movemap)
tuple test::T400_Refinement::pose = pose_from_pdb("test/data/test_fragments.pdb")
tuple test::T400_Refinement::pose_frag = pose_from_pdb("test/data/test_fragments.pdb")
tuple test::T400_Refinement::scorefxn = create_score_function_ws_patch("standard", "score12")
tuple test::T400_Refinement::seqmover = SequenceMover()
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