Rosetta 3.3
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src/basic/options/option.cc File Reference

Program options global and initialization function. More...

#include <basic/options/option.hh>
#include <basic/options/option.cc.include.gen.hh>
#include <utility/options/OptionCollection.hh>
#include <basic/Tracer.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/options/option.cc.gen.hh>
#include <platform/types.hh>
#include <basic/options/keys/AnchoredDesign.OptionKeys.gen.hh>
#include <basic/options/keys/DenovoProteinDesign.OptionKeys.gen.hh>
#include <basic/options/keys/DomainAssembly.OptionKeys.gen.hh>
#include <basic/options/keys/LoopModel.OptionKeys.gen.hh>
#include <basic/options/keys/MM.OptionKeys.gen.hh>
#include <basic/options/keys/MonteCarlo.OptionKeys.gen.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/PCS.OptionKeys.gen.hh>
#include <basic/options/keys/RBSegmentRelax.OptionKeys.gen.hh>
#include <basic/options/keys/SSrbrelax.OptionKeys.gen.hh>
#include <basic/options/keys/abinitio.OptionKeys.gen.hh>
#include <basic/options/keys/abrelax.OptionKeys.gen.hh>
#include <basic/options/keys/antibody.OptionKeys.gen.hh>
#include <basic/options/keys/archive.OptionKeys.gen.hh>
#include <basic/options/keys/assembly.OptionKeys.gen.hh>
#include <basic/options/keys/backrub.OptionKeys.gen.hh>
#include <basic/options/keys/blivens.OptionKeys.gen.hh>
#include <basic/options/keys/boinc.OptionKeys.gen.hh>
#include <basic/options/keys/broker.OptionKeys.gen.hh>
#include <basic/options/keys/casp.OptionKeys.gen.hh>
#include <basic/options/keys/chunk.OptionKeys.gen.hh>
#include <basic/options/keys/cluster.OptionKeys.gen.hh>
#include <basic/options/keys/cm.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/ddg.OptionKeys.gen.hh>
#include <basic/options/keys/dna.OptionKeys.gen.hh>
#include <basic/options/keys/docking.OptionKeys.gen.hh>
#include <basic/options/keys/edensity.OptionKeys.gen.hh>
#include <basic/options/keys/enzdes.OptionKeys.gen.hh>
#include <basic/options/keys/evaluation.OptionKeys.gen.hh>
#include <basic/options/keys/evolution.OptionKeys.gen.hh>
#include <basic/options/keys/fast_loops.OptionKeys.gen.hh>
#include <basic/options/keys/filters.OptionKeys.gen.hh>
#include <basic/options/keys/fldsgn.OptionKeys.gen.hh>
#include <basic/options/keys/flexPepDocking.OptionKeys.gen.hh>
#include <basic/options/keys/flexpack.OptionKeys.gen.hh>
#include <basic/options/keys/flxbb.OptionKeys.gen.hh>
#include <basic/options/keys/fold_and_dock.OptionKeys.gen.hh>
#include <basic/options/keys/fold_cst.OptionKeys.gen.hh>
#include <basic/options/keys/fold_from_loops.OptionKeys.gen.hh>
#include <basic/options/keys/frags.OptionKeys.gen.hh>
#include <basic/options/keys/holes.OptionKeys.gen.hh>
#include <basic/options/keys/hotspot.OptionKeys.gen.hh>
#include <basic/options/keys/inout.OptionKeys.gen.hh>
#include <basic/options/keys/james.OptionKeys.gen.hh>
#include <basic/options/keys/jd2.OptionKeys.gen.hh>
#include <basic/options/keys/jumps.OptionKeys.gen.hh>
#include <basic/options/keys/krassk.OptionKeys.gen.hh>
#include <basic/options/keys/loopfcst.OptionKeys.gen.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <basic/options/keys/match.OptionKeys.gen.hh>
#include <basic/options/keys/mc.OptionKeys.gen.hh>
#include <basic/options/keys/membrane.OptionKeys.gen.hh>
#include <basic/options/keys/ms.OptionKeys.gen.hh>
#include <basic/options/keys/murphp.OptionKeys.gen.hh>
#include <basic/options/keys/optE.OptionKeys.gen.hh>
#include <basic/options/keys/packstat.OptionKeys.gen.hh>
#include <basic/options/keys/parser.OptionKeys.gen.hh>
#include <basic/options/keys/phil.OptionKeys.gen.hh>
#include <basic/options/keys/pose_metrics.OptionKeys.gen.hh>
#include <basic/options/keys/rdc.OptionKeys.gen.hh>
#include <basic/options/keys/relax.OptionKeys.gen.hh>
#include <basic/options/keys/remodel.OptionKeys.gen.hh>
#include <basic/options/keys/resample.OptionKeys.gen.hh>
#include <basic/options/keys/rescore.OptionKeys.gen.hh>
#include <basic/options/keys/residues.OptionKeys.gen.hh>
#include <basic/options/keys/rna.OptionKeys.gen.hh>
#include <basic/options/keys/robert.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/symmetry.OptionKeys.gen.hh>
#include <basic/options/keys/templates.OptionKeys.gen.hh>
#include <basic/options/keys/threadsc.OptionKeys.gen.hh>
#include <basic/options/keys/ufv.OptionKeys.gen.hh>
#include <utility/Bound.fwd.hh>
#include <utility/Bound.hh>
#include <utility/down_cast.hh>
#include <utility/exit.hh>
#include <utility/vector1.fwd.hh>
#include <utility/vector1.hh>
#include <utility/vector1_bool.hh>
#include <utility/vectorL.fwd.hh>
#include <utility/vectorL.hh>
#include <utility/vectorL_Selector.hh>
#include <utility/vectorL_bool.hh>
#include <utility/file/FileName.fwd.hh>
#include <utility/file/FileName.hh>
#include <utility/file/PathName.fwd.hh>
#include <utility/file/PathName.hh>
#include <utility/keys/AutoKey.fwd.hh>
#include <utility/keys/AutoKey.hh>
#include <utility/keys/Key.fwd.hh>
#include <utility/keys/Key.hh>
#include <utility/keys/KeyLess.fwd.hh>
#include <utility/keys/KeyLookup.fwd.hh>
#include <utility/keys/KeyLookup.hh>
#include <utility/keys/NoClient.fwd.hh>
#include <utility/keys/NoClient.hh>
#include <utility/keys/SmallKeyVector.fwd.hh>
#include <utility/keys/SmallKeyVector.hh>
#include <utility/keys/UserKey.fwd.hh>
#include <utility/keys/VariantKey.fwd.hh>
#include <utility/keys/VariantKey.hh>
#include <utility/options/AnyOption.fwd.hh>
#include <utility/options/AnyOption.hh>
#include <utility/options/AnyVectorOption.fwd.hh>
#include <utility/options/AnyVectorOption.hh>
#include <utility/options/BooleanOption.fwd.hh>
#include <utility/options/BooleanOption.hh>
#include <utility/options/BooleanVectorOption.fwd.hh>
#include <utility/options/BooleanVectorOption.hh>
#include <utility/options/FileOption.fwd.hh>
#include <utility/options/FileOption.hh>
#include <utility/options/FileVectorOption.fwd.hh>
#include <utility/options/FileVectorOption.hh>
#include <utility/options/IntegerOption.fwd.hh>
#include <utility/options/IntegerOption.hh>
#include <utility/options/IntegerVectorOption.fwd.hh>
#include <utility/options/IntegerVectorOption.hh>
#include <utility/options/Option.fwd.hh>
#include <utility/options/Option.hh>
#include <utility/options/OptionCollection.fwd.hh>
#include <utility/options/PathOption.fwd.hh>
#include <utility/options/PathOption.hh>
#include <utility/options/PathVectorOption.fwd.hh>
#include <utility/options/PathVectorOption.hh>
#include <utility/options/RealOption.fwd.hh>
#include <utility/options/RealOption.hh>
#include <utility/options/RealVectorOption.fwd.hh>
#include <utility/options/RealVectorOption.hh>
#include <utility/options/ScalarOption.fwd.hh>
#include <utility/options/ScalarOption.hh>
#include <utility/options/ScalarOption_T_.fwd.hh>
#include <utility/options/ScalarOption_T_.hh>
#include <utility/options/StringOption.fwd.hh>
#include <utility/options/StringOption.hh>
#include <utility/options/StringVectorOption.fwd.hh>
#include <utility/options/StringVectorOption.hh>
#include <utility/options/VariantOption.fwd.hh>
#include <utility/options/VariantOption.hh>
#include <utility/options/VectorOption.fwd.hh>
#include <utility/options/VectorOption.hh>
#include <utility/options/VectorOption_T_.fwd.hh>
#include <utility/options/VectorOption_T_.hh>
#include <utility/options/mpi_stderr.hh>
#include <utility/options/keys/AnyOptionKey.fwd.hh>
#include <utility/options/keys/AnyOptionKey.hh>
#include <utility/options/keys/AnyVectorOptionKey.fwd.hh>
#include <utility/options/keys/AnyVectorOptionKey.hh>
#include <utility/options/keys/BooleanOptionKey.fwd.hh>
#include <utility/options/keys/BooleanOptionKey.hh>
#include <utility/options/keys/BooleanVectorOptionKey.fwd.hh>
#include <utility/options/keys/BooleanVectorOptionKey.hh>
#include <utility/options/keys/FileOptionKey.fwd.hh>
#include <utility/options/keys/FileOptionKey.hh>
#include <utility/options/keys/FileVectorOptionKey.fwd.hh>
#include <utility/options/keys/FileVectorOptionKey.hh>
#include <utility/options/keys/IntegerOptionKey.fwd.hh>
#include <utility/options/keys/IntegerOptionKey.hh>
#include <utility/options/keys/IntegerVectorOptionKey.fwd.hh>
#include <utility/options/keys/IntegerVectorOptionKey.hh>
#include <utility/options/keys/OptionKey.fwd.hh>
#include <utility/options/keys/OptionKey.hh>
#include <utility/options/keys/OptionKeys.hh>
#include <utility/options/keys/PathOptionKey.fwd.hh>
#include <utility/options/keys/PathOptionKey.hh>
#include <utility/options/keys/PathVectorOptionKey.fwd.hh>
#include <utility/options/keys/PathVectorOptionKey.hh>
#include <utility/options/keys/RealOptionKey.fwd.hh>
#include <utility/options/keys/RealOptionKey.hh>
#include <utility/options/keys/RealVectorOptionKey.fwd.hh>
#include <utility/options/keys/RealVectorOptionKey.hh>
#include <utility/options/keys/ScalarOptionKey.fwd.hh>
#include <utility/options/keys/ScalarOptionKey.hh>
#include <utility/options/keys/StringOptionKey.fwd.hh>
#include <utility/options/keys/StringOptionKey.hh>
#include <utility/options/keys/StringVectorOptionKey.fwd.hh>
#include <utility/options/keys/StringVectorOptionKey.hh>
#include <utility/options/keys/VectorOptionKey.fwd.hh>
#include <utility/options/keys/VectorOptionKey.hh>
#include <utility/options/keys/all.hh>
#include <utility/pointer/ReferenceCount.fwd.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <utility/pointer/owning_ptr.functions.hh>
#include <utility/pointer/owning_ptr.fwd.hh>
#include <utility/pointer/owning_ptr.hh>
#include <ObjexxFCL/TypeTraits.hh>
#include <ObjexxFCL/char.functions.hh>
#include <ObjexxFCL/string.functions.hh>
#include <algorithm>
#include <cassert>
#include <cstddef>
#include <cstdlib>
#include <iomanip>
#include <iosfwd>
#include <iostream>
#include <list>
#include <map>
#include <ostream>
#include <set>
#include <sstream>
#include <string>
#include <utility>
#include <vector>

Namespaces

namespace  basic
namespace  basic::options

Functions

int const basic::options::silent (0)
 Named verbosity levels.
int const basic::options::quiet (1)
int const basic::options::standard (2)
int const basic::options::inform (4)
int const basic::options::chat (6)
int const basic::options::yap (7)
int const basic::options::gush (8)
int const basic::options::verbose (9)
OptionCollectionbasic::options::initialize ()
 Initialize the options.
OptionCollectionbasic::options::process ()
 Process the specified options note Do more complex value setup and checks here than the option system provides.

Variables

utility::options::OptionCollection basic::options::option
 OptionCollection global.

Detailed Description

Program options global and initialization function.

Author:
Stuart G. Mentzer (Stuart_Mentzer@objexx.com)
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