Rosetta 3.3
Namespaces | Functions
src/numeric/agglomerative_hierarchical_clustering.hh File Reference

hierarchical clustering utilities More...

#include <numeric/ClusteringTreeNode.hh>
#include <utility/vector1.hh>

Namespaces

namespace  numeric
 

A 1D histogram based upon a map structure.


Functions

template<class T >
void numeric::get_cluster_data (utility::vector1< T > &data_in, ClusteringTreeNodeOP cluster, utility::vector1< T > &data_out)
utility::vector1
< ClusteringTreeNodeOP > 
numeric::single_link_clustering (utility::vector1< utility::vector1< Real > > &distance_matrix, Size n_clusters)
utility::vector1
< ClusteringTreeNodeOP > 
numeric::average_link_clustering (utility::vector1< utility::vector1< Real > > &distance_matrix, Size n_clusters)
utility::vector1
< ClusteringTreeNodeOP > 
numeric::complete_link_clustering (utility::vector1< utility::vector1< Real > > &distance_matrix, Size n_clusters)

Detailed Description

hierarchical clustering utilities

Author:
Dominik Gront (dgront@chem.uw.edu.pl)
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