PyMOLPyRosettaServer::PR_PyMOLServer Class Reference

Collaboration diagram for PyMOLPyRosettaServer::PR_PyMOLServer:

List of all members.

Public Member Functions
def	color_model
def	processPacket
Static Public Attributes
tuple	data = bz2.decompress(data)
tuple	size = int(data[0])
list	data = data[1:]
list	dat = data[i+6:i+6+size]
string	sel = '%s and chain %s and resi %s'
string	color = 'blue'
string	bb = '(name N or name CA or name C or name O)'
tuple	njump = int(data[:2])
int	scale = 1
list	jumps = []
string	connect = 'red'
tuple	connect = str(25+int(data[i]))
string	jumpsall = 'None'
int	r = 3
int	th = 2
tuple	cylx = r*math.cos(th)
tuple	cyly = r*math.sin(th)
tuple	start = (jumps[j-1][0]-1)
tuple	stop = (jumps[j-1][1]-1)
tuple	cut = (jumps[j-1][2]-1)
string	jump = 'jump_'
list	nhbonds = data[:5]
int	c = 22
list	acc_res = data[c:c+5]
list	acc_chain = data[c+5]
list	acc_name = data[c+6:c+10]
list	don_res = data[c+10:c+15]
list	don_chain = data[c+15]
list	don_name = data[c+16:c+20]
string	hbname = 'hb_'
list	options = data[:21]
list	connect = options[:7]
tuple	scale = bool(int(options[7:8]))
list	axis_color = options[8:15]
tuple	num = int(options[15:])
list	x_array = [0]
list	y_array = [0]
list	z_array = [0]

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Member Function Documentation

def PyMOLPyRosettaServer::PR_PyMOLServer::color_model	(		self,
			name,
			etype,
			s
	)

def PyMOLPyRosettaServer::PR_PyMOLServer::processPacket	(		self,
			msg
	)

Format description:
    bytes 0:8   - packet type
    byte  8     - flags
    byte  9     - len(name)
    bytes 10:... - name
    bytes ...:... - mesage its self

---

Member Data Documentation

list PyMOLPyRosettaServer::PR_PyMOLServer::acc_chain = data[c+5] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::acc_name = data[c+6:c+10] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::acc_res = data[c:c+5] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::axis_color = options[8:15] [static]

string PyMOLPyRosettaServer::PR_PyMOLServer::bb = '(name N or name CA or name C or name O)' [static]

int PyMOLPyRosettaServer::PR_PyMOLServer::c = 22 [static]

string PyMOLPyRosettaServer::PR_PyMOLServer::color = 'blue' [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::connect = options[:7] [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::connect = 'red' [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::connect = str(25+int(data[i])) [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::cut = (jumps[j-1][2]-1) [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::cylx = r*math.cos(th) [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::cyly = r*math.sin(th) [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::dat = data[i+6:i+6+size] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::data = bz2.decompress(data) [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::data = data[1:] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::don_chain = data[c+15] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::don_name = data[c+16:c+20] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::don_res = data[c+10:c+15] [static]

string PyMOLPyRosettaServer::PR_PyMOLServer::hbname = 'hb_' [static]

string PyMOLPyRosettaServer::PR_PyMOLServer::jump = 'jump_' [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::jumps = [] [static]

string PyMOLPyRosettaServer::PR_PyMOLServer::jumpsall = 'None' [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::nhbonds = data[:5] [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::njump = int(data[:2]) [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::num = int(options[15:]) [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::options = data[:21] [static]

int PyMOLPyRosettaServer::PR_PyMOLServer::r = 3 [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::scale = bool(int(options[7:8])) [static]

int PyMOLPyRosettaServer::PR_PyMOLServer::scale = 1 [static]

string PyMOLPyRosettaServer::PR_PyMOLServer::sel = '%s and chain %s and resi %s' [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::size = int(data[0]) [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::start = (jumps[j-1][0]-1) [static]

tuple PyMOLPyRosettaServer::PR_PyMOLServer::stop = (jumps[j-1][1]-1) [static]

int PyMOLPyRosettaServer::PR_PyMOLServer::th = 2 [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::x_array = [0] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::y_array = [0] [static]

list PyMOLPyRosettaServer::PR_PyMOLServer::z_array = [0] [static]

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The documentation for this class was generated from the following file:

• src/python/bindings/PyMOLPyRosettaServer.py