FloppyTailMover Class Reference

FloppyTail mover. More...

Inheritance diagram for FloppyTailMover:

Collaboration diagram for FloppyTailMover:

List of all members.

Public Member Functions
	FloppyTailMover ()
virtual void	init_on_new_input (core::pose::Pose const &pose)
	init_on_new_input system allows for initializing these details the first time apply() is called. the job distributor will reinitialize the whole mover when the input changes (a freshly constructed mover, which will re-run this on first apply().
virtual	~FloppyTailMover ()
virtual void	apply (core::pose::Pose &pose)
virtual std::string	get_name () const
virtual protocols::moves::MoverOP	fresh_instance () const
virtual bool	reinitialize_for_each_job () const
virtual bool	reinitialize_for_new_input () const

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Detailed Description

FloppyTail mover.

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Constructor & Destructor Documentation

FloppyTailMover::FloppyTailMover

(

)

[inline]

References basic::options::OptionKeys::in::file::frag3, basic::options::option, basic::options::OptionKeys::pair_off, basic::options::OptionKeys::frags::scoring::scoring, TR, basic::options::OptionKeys::mysql::user, and value.

Referenced by fresh_instance().

virtual FloppyTailMover::~FloppyTailMover

(

)

[inline, virtual]

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Member Function Documentation

virtual void FloppyTailMover::apply

(

core::pose::Pose &

pose

)

[inline, virtual]

References basic::options::OptionKeys::AnchoredDesign::AnchoredDesign, create_extra_output(), basic::options::OptionKeys::abinitio::debug, basic::options::OptionKeys::dna::design::flush, color_pdb::i, init_on_new_input(), basic::options::OptionKeys::jd2::jd2, basic::options::OptionKeys::run::min_type, basic::options::OptionKeys::MonteCarlo::MonteCarlo, option, basic::options::option, basic::options::OptionKeys::AnchoredDesign::perturb_cycles, basic::options::OptionKeys::AnchoredDesign::perturb_show, basic::options::OptionKeys::AnchoredDesign::perturb_temp, PyMOL_demo::pose, basic::options::OptionKeys::publication, basic::options::OptionKeys::AnchoredDesign::refine_cycles, basic::options::OptionKeys::AnchoredDesign::refine_repack_cycles, basic::options::OptionKeys::AnchoredDesign::refine_temp, basic::options::OptionKeys::shear_on, basic::options::OptionKeys::short_tail_off, TR, and value.

virtual protocols::moves::MoverOP FloppyTailMover::fresh_instance

(

)

const [inline, virtual]

References FloppyTailMover().

virtual std::string FloppyTailMover::get_name

(

)

const [inline, virtual]

virtual void FloppyTailMover::init_on_new_input

(

core::pose::Pose const &

pose

)

[inline, virtual]

init_on_new_input system allows for initializing these details the first time apply() is called. the job distributor will reinitialize the whole mover when the input changes (a freshly constructed mover, which will re-run this on first apply().

References basic::options::OptionKeys::C_root, basic::options::OptionKeys::run::chain, basic::options::OptionKeys::flexible_chain, basic::options::OptionKeys::flexible_start_resnum, basic::options::OptionKeys::flexible_stop_resnum, color_pdb::i, basic::options::option, option, options, packing::resfile(), basic::options::OptionKeys::short_tail_fraction, TR, basic::options::OptionKeys::mysql::user, and value.

Referenced by apply().

virtual bool FloppyTailMover::reinitialize_for_each_job

(

)

const [inline, virtual]

virtual bool FloppyTailMover::reinitialize_for_new_input

(

)

const [inline, virtual]

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The documentation for this class was generated from the following file:

• src/apps/public/scenarios/FloppyTail.cc