Rosetta 3.3
Functions
cm Namespace Reference

Functions

BooleanOptionKey const cm ("cm")
BooleanOptionKey const start_models_only ("cm:start_models_only")
StringOptionKey const aln_format ("cm:aln_format")
BooleanOptionKey const recover_side_chains ("cm:recover_side_chains")
StringOptionKey const loop_mover ("cm:loop_mover")
IntegerOptionKey const loop_close_level ("cm:loop_close_level")
IntegerOptionKey const min_loop_size ("cm:min_loop_size")
IntegerOptionKey const max_loop_rebuild ("cm:max_loop_rebuild")
RealOptionKey const loop_rebuild_filter ("cm:loop_rebuild_filter")
RealOptionKey const aln_length_filter_quantile ("cm:aln_length_filter_quantile")
IntegerOptionKey const aln_length_filter ("cm:aln_length_filter")
StringVectorOptionKey const template_ids ("cm:template_ids")
FileOptionKey const ligand_pdb ("cm:ligand_pdb")
StringVectorOptionKey const seq_score ("cm:seq_score")
StringOptionKey const aligner ("cm:aligner")
RealOptionKey const min_gap_open ("cm:min_gap_open")
RealOptionKey const max_gap_open ("cm:max_gap_open")
RealOptionKey const min_gap_extend ("cm:min_gap_extend")
RealOptionKey const max_gap_extend ("cm:max_gap_extend")
IntegerOptionKey const nn ("cm:nn")
RealOptionKey const fr_temperature ("cm:fr_temperature")
FileVectorOptionKey const ev_map ("cm:ev_map")
FileVectorOptionKey const hh_map ("cm:hh_map")

Function Documentation

StringOptionKey const cm::aligner ( "cm:aligner"  )
StringOptionKey const cm::aln_format ( "cm:aln_format"  )

Referenced by main().

IntegerOptionKey const cm::aln_length_filter ( "cm:aln_length_filter"  )
RealOptionKey const cm::aln_length_filter_quantile ( "cm:aln_length_filter_quantile"  )
BooleanOptionKey const cm::cm ( "cm"  )
FileVectorOptionKey const cm::ev_map ( "cm:ev_map"  )
RealOptionKey const cm::fr_temperature ( "cm:fr_temperature"  )
FileVectorOptionKey const cm::hh_map ( "cm:hh_map"  )
FileOptionKey const cm::ligand_pdb ( "cm:ligand_pdb"  )
IntegerOptionKey const cm::loop_close_level ( "cm:loop_close_level"  )
StringOptionKey const cm::loop_mover ( "cm:loop_mover"  )
RealOptionKey const cm::loop_rebuild_filter ( "cm:loop_rebuild_filter"  )
RealOptionKey const cm::max_gap_extend ( "cm:max_gap_extend"  )
RealOptionKey const cm::max_gap_open ( "cm:max_gap_open"  )
IntegerOptionKey const cm::max_loop_rebuild ( "cm:max_loop_rebuild"  )
RealOptionKey const cm::min_gap_extend ( "cm:min_gap_extend"  )

Referenced by main().

RealOptionKey const cm::min_gap_open ( "cm:min_gap_open"  )

Referenced by main().

IntegerOptionKey const cm::min_loop_size ( "cm:min_loop_size"  )

Referenced by main().

IntegerOptionKey const cm::nn ( "cm:nn"  )
BooleanOptionKey const cm::recover_side_chains ( "cm:recover_side_chains"  )
StringVectorOptionKey const cm::seq_score ( "cm:seq_score"  )

Referenced by main().

BooleanOptionKey const cm::start_models_only ( "cm:start_models_only"  )
StringVectorOptionKey const cm::template_ids ( "cm:template_ids"  )
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Defines