Rosetta 3.3
Functions
cluster Namespace Reference

Functions

BooleanOptionKey const cluster ("cluster")
BooleanOptionKey const lite ("cluster:lite")
RealOptionKey const input_score_filter ("cluster:input_score_filter")
RealOptionKey const output_score_filter ("cluster:output_score_filter")
IntegerVectorOptionKey const exclude_res ("cluster:exclude_res")
RealOptionKey const thinout_factor ("cluster:thinout_factor")
IntegerOptionKey const max_cluster_seeds ("cluster:max_cluster_seeds")
RealOptionKey const radius ("cluster:radius")
IntegerOptionKey const limit_cluster_size ("cluster:limit_cluster_size")
IntegerOptionKey const limit_clusters ("cluster:limit_clusters")
IntegerOptionKey const limit_total_structures ("cluster:limit_total_structures")
IntegerOptionKey const max_total_cluster ("cluster:max_total_cluster")
BooleanOptionKey const gdtmm ("cluster:gdtmm")
BooleanOptionKey const sort_groups_by_energy ("cluster:sort_groups_by_energy")
BooleanOptionKey const remove_singletons ("cluster:remove_singletons")
BooleanOptionKey const export_only_low ("cluster:export_only_low")
BooleanOptionKey const remove_highest_energy_member ("cluster:remove_highest_energy_member")
BooleanOptionKey const idealize_final_structures ("cluster:idealize_final_structures")
IntegerOptionKey const limit_dist_matrix ("cluster:limit_dist_matrix")
BooleanOptionKey const make_ensemble_cst ("cluster:make_ensemble_cst")
BooleanOptionKey const hotspot_hash ("cluster:hotspot_hash")
BooleanOptionKey const loops ("cluster:loops")
RealOptionKey const population_weight ("cluster:population_weight")
StringOptionKey const template_scores ("cluster:template_scores")
IntegerOptionKey const K_level ("cluster:K_level")
RealVectorOptionKey const K_radius ("cluster:K_radius")
IntegerVectorOptionKey const K_n_cluster ("cluster:K_n_cluster")
StringVectorOptionKey const K_style ("cluster:K_style")
RealOptionKey const K_threshold ("cluster:K_threshold")
IntegerOptionKey const K_n_sub ("cluster:K_n_sub")
IntegerOptionKey const K_deque_size ("cluster:K_deque_size")
IntegerOptionKey const K_deque_level ("cluster:K_deque_level")
BooleanOptionKey const K_redundant ("cluster:K_redundant")
BooleanOptionKey const K_not_fit_xyz ("cluster:K_not_fit_xyz")
BooleanOptionKey const K_save_headers ("cluster:K_save_headers")

Function Documentation

BooleanOptionKey const cluster::cluster ( "cluster"  )
IntegerVectorOptionKey const cluster::exclude_res ( "cluster:exclude_res"  )
BooleanOptionKey const cluster::export_only_low ( "cluster:export_only_low"  )
BooleanOptionKey const cluster::gdtmm ( "cluster:gdtmm"  )
BooleanOptionKey const cluster::hotspot_hash ( "cluster:hotspot_hash"  )
BooleanOptionKey const cluster::idealize_final_structures ( "cluster:idealize_final_structures"  )
RealOptionKey const cluster::input_score_filter ( "cluster:input_score_filter"  )
IntegerOptionKey const cluster::K_deque_level ( "cluster:K_deque_level"  )
IntegerOptionKey const cluster::K_deque_size ( "cluster:K_deque_size"  )
IntegerOptionKey const cluster::K_level ( "cluster:K_level"  )
IntegerVectorOptionKey const cluster::K_n_cluster ( "cluster:K_n_cluster"  )
IntegerOptionKey const cluster::K_n_sub ( "cluster:K_n_sub"  )
BooleanOptionKey const cluster::K_not_fit_xyz ( "cluster:K_not_fit_xyz"  )
RealVectorOptionKey const cluster::K_radius ( "cluster:K_radius"  )
BooleanOptionKey const cluster::K_redundant ( "cluster:K_redundant"  )
BooleanOptionKey const cluster::K_save_headers ( "cluster:K_save_headers"  )
StringVectorOptionKey const cluster::K_style ( "cluster:K_style"  )
RealOptionKey const cluster::K_threshold ( "cluster:K_threshold"  )
IntegerOptionKey const cluster::limit_cluster_size ( "cluster:limit_cluster_size"  )
IntegerOptionKey const cluster::limit_clusters ( "cluster:limit_clusters"  )
IntegerOptionKey const cluster::limit_dist_matrix ( "cluster:limit_dist_matrix"  )
IntegerOptionKey const cluster::limit_total_structures ( "cluster:limit_total_structures"  )
BooleanOptionKey const cluster::lite ( "cluster:lite"  )
BooleanOptionKey const cluster::loops ( "cluster:loops"  )
BooleanOptionKey const cluster::make_ensemble_cst ( "cluster:make_ensemble_cst"  )
IntegerOptionKey const cluster::max_cluster_seeds ( "cluster:max_cluster_seeds"  )
IntegerOptionKey const cluster::max_total_cluster ( "cluster:max_total_cluster"  )
RealOptionKey const cluster::output_score_filter ( "cluster:output_score_filter"  )
RealOptionKey const cluster::population_weight ( "cluster:population_weight"  )
RealOptionKey const cluster::radius ( "cluster:radius"  )
BooleanOptionKey const cluster::remove_highest_energy_member ( "cluster:remove_highest_energy_member"  )
BooleanOptionKey const cluster::remove_singletons ( "cluster:remove_singletons"  )
BooleanOptionKey const cluster::sort_groups_by_energy ( "cluster:sort_groups_by_energy"  )
StringOptionKey const cluster::template_scores ( "cluster:template_scores"  )
RealOptionKey const cluster::thinout_factor ( "cluster:thinout_factor"  )
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