Rosetta 3.3
Variables
basic::options::OptionKeys::enzdes Namespace Reference

Variables

BooleanOptionKey const enzdes
StringOptionKey const checkpoint
BooleanOptionKey const enz_score
BooleanOptionKey const enz_repack
BooleanOptionKey const cst_opt
BooleanOptionKey const cst_predock
RealOptionKey const trans_magnitude
RealOptionKey const rot_magnitude
RealOptionKey const dock_trials
BooleanOptionKey const cst_min
BooleanOptionKey const cst_design
IntegerOptionKey const design_min_cycles
BooleanOptionKey const make_consensus_mutations
BooleanOptionKey const bb_min
RealOptionKey const bb_min_allowed_dev
RealOptionKey const loop_bb_min_allowed_dev
RealOptionKey const minimize_ligand_torsions
RealOptionKey const minimize_all_ligand_torsions
BooleanOptionKey const chi_min
BooleanOptionKey const min_all_jumps
BooleanOptionKey const cst_dock
BooleanOptionKey const run_ligand_motifs
BooleanOptionKey const enz_debug
FileOptionKey const cstfile
FileOptionKey const enz_loops_file
BooleanOptionKey const flexbb_protocol
BooleanOptionKey const remodel_protocol
BooleanOptionKey const kic_loop_sampling
StringOptionKey const dump_loop_samples
BooleanOptionKey const fix_catalytic_aa
IntegerOptionKey const additional_packing_ligand_rb_confs
IntegerOptionKey const ex_catalytic_rot
IntegerOptionKey const single_loop_ensemble_size
IntegerOptionKey const loop_generator_trials
BooleanOptionKey const no_catres_min_in_loopgen
RealOptionKey const mc_kt_low
RealOptionKey const mc_kt_high
RealOptionKey const min_cacb_deviation
RealOptionKey const max_bb_deviation
RealOptionKey const max_bb_deviation_from_startstruct
IntegerOptionKey const flexbb_outstructs
IntegerOptionKey const remodel_trials
BooleanOptionKey const remodel_secmatch
BooleanOptionKey const dump_inverse_rotamers
RealOptionKey const remodel_aggressiveness
RealOptionKey const favor_native_res
BooleanOptionKey const detect_design_interface
BooleanOptionKey const include_catres_in_interface_detection
BooleanOptionKey const arg_sweep_interface
RealOptionKey const cut1
RealOptionKey const cut2
RealOptionKey const cut3
RealOptionKey const cut4
RealOptionKey const lig_packer_weight
BooleanOptionKey const no_unconstrained_repack
RealOptionKey const secmatch_Ecutoff
FileOptionKey const change_lig
StringOptionKey const process_ligrot_separately
BooleanOptionKey const start_from_random_rb_conf
RealOptionKey const bb_bump_cutoff
RealOptionKey const sc_sc_bump_cutoff
BooleanOptionKey const no_packstat_calculation
StringOptionKey const compare_native
BooleanOptionKey const final_repack_without_ligand
BooleanOptionKey const dump_final_repack_without_ligand_pdb
BooleanOptionKey const parser_read_cloud_pdb

Variable Documentation

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1(), and main().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1(), and main().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1(), and main().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1(), and main().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1(), and main().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1(), and main().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

Referenced by add_rosetta_options_1().

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