core::scoring::methods::DistanceChainbreakEnergy Class Reference

DistanceChainbreakEnergy class iterates across all residues in finalize() and determines the penalty between residues i and i+1 by how far apart their N and C atom are. More...

#include <DistanceChainbreakEnergy.hh>

Inheritance diagram for core::scoring::methods::DistanceChainbreakEnergy:

Collaboration diagram for core::scoring::methods::DistanceChainbreakEnergy:

List of all members.

Public Types
typedef WholeStructureEnergy	parent
Public Member Functions
	DistanceChainbreakEnergy ()
virtual EnergyMethodOP	clone () const
	clone
virtual void	finalize_total_energy (pose::Pose &pose, ScoreFunction const &, EnergyMap &totals) const
	called at the end of energy evaluation
virtual void	indicate_required_context_graphs (utility::vector1< bool > &) const
	DistanceChainbreak Energy is context independent and thus indicates that no context graphs need to be maintained by class Energies.
virtual core::Size	version () const
	Return the version of the energy method.

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Detailed Description

DistanceChainbreakEnergy class iterates across all residues in finalize() and determines the penalty between residues i and i+1 by how far apart their N and C atom are.

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Member Typedef Documentation

typedef WholeStructureEnergy core::scoring::methods::DistanceChainbreakEnergy::parent

Reimplemented from core::scoring::methods::WholeStructureEnergy.

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Constructor & Destructor Documentation

core::scoring::methods::DistanceChainbreakEnergy::DistanceChainbreakEnergy

(

)

Referenced by clone().

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Member Function Documentation

virtual EnergyMethodOP core::scoring::methods::DistanceChainbreakEnergy::clone

(

)

const [inline, virtual]

clone

Implements core::scoring::methods::EnergyMethod.

References DistanceChainbreakEnergy().

void core::scoring::methods::DistanceChainbreakEnergy::finalize_total_energy	(	pose::Pose &	pose,
		ScoreFunction const &	,
		EnergyMap &	totals
	)		const [virtual]

called at the end of energy evaluation

Reimplemented from core::scoring::methods::EnergyMethod.

References core::kinematics::FoldTree::cutpoint(), core::chemical::CUTPOINT_LOWER, core::chemical::CUTPOINT_UPPER, core::kinematics::distance(), core::scoring::distance_chainbreak, core::pose::Pose::fold_tree(), core::kinematics::FoldTree::num_cutpoint(), core::pose::Pose::residue(), and core::scoring::methods::tr().

void core::scoring::methods::DistanceChainbreakEnergy::indicate_required_context_graphs

(

utility::vector1< bool > &

)

const [virtual]

DistanceChainbreak Energy is context independent and thus indicates that no context graphs need to be maintained by class Energies.

Implements core::scoring::methods::EnergyMethod.

core::Size core::scoring::methods::DistanceChainbreakEnergy::version

(

)

const [virtual]

Return the version of the energy method.

Implements core::scoring::methods::EnergyMethod.

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The documentation for this class was generated from the following files:

• src/core/scoring/methods/DistanceChainbreakEnergy.hh
• src/core/scoring/methods/DistanceChainbreakEnergy.cc