Rosetta 3.4
Classes | Namespaces
src/protocols/frag_picker/scores/ProfileScore.hh File Reference

FragmentScoringMethod forward declaration. More...

#include <core/types.hh>
#include <protocols/frag_picker/scores/ProfileScore.fwd.hh>
#include <protocols/frag_picker/scores/CachingScoringMethod.hh>
#include <protocols/frag_picker/scores/FragmentScoreMap.fwd.hh>
#include <core/sequence/SequenceProfile.hh>
#include <core/sequence/ScoringScheme.hh>
#include <utility/vector1.hh>

Classes

class  protocols::frag_picker::scores::ProfileScore
 a fragment candidate More...
class  protocols::frag_picker::scores::MakeProfileScore

Namespaces

namespace  protocols
 

The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.


namespace  protocols::frag_picker
namespace  protocols::frag_picker::scores

Detailed Description

FragmentScoringMethod forward declaration.

scores a fragment by L1 profile score

scores a fragment by weighting L1 profile distances by residue type

scores a fragment by Blosum62 profile score

scores a fragment by an amino acid sequence identity

Author:
Dominik Gront (dgront@chem.uw.edu.pl)
Robert Vernon
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