Rosetta 3.4
Namespaces | Functions
src/protocols/flxbb/LayerDesignOperation.cc File Reference

Design residues with selected amino acids depending on the enviroment: layer. The layer of each residue is assigned as core, boundary, or surface, which are defined by accessible surface of mainchain + CB. If resfile is read before calling this operation, this operation is not applied for the residues defined by PIKAA. More...

#include <protocols/flxbb/LayerDesignOperation.hh>
#include <protocols/flxbb/LayerDesignOperationCreator.hh>
#include <core/pose/Pose.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <basic/Tracer.hh>
#include <protocols/toolbox/SelectResiduesByLayer.hh>
#include <utility/string_util.hh>
#include <utility/tag/Tag.hh>
#include <utility/vector1.hh>
#include <string>
#include <utility/vector0.hh>
#include <ObjexxFCL/format.hh>
#include <basic/options/keys/OptionKeys.hh>

Namespaces

namespace  protocols
 

The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.


namespace  protocols::flxbb

Functions

static basic::Tracer TR ("protocols.flxbb.LayerDesignOperation")

Detailed Description

Design residues with selected amino acids depending on the enviroment: layer. The layer of each residue is assigned as core, boundary, or surface, which are defined by accessible surface of mainchain + CB. If resfile is read before calling this operation, this operation is not applied for the residues defined by PIKAA.

Author:
Nobuyasu Koga ( nobuyasu@uw.edu )

Function Documentation

static basic::Tracer TR ( "protocols.flxbb.LayerDesignOperation"  ) [static]
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