Rosetta 3.4
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src/protocols/comparative_modeling/hybridize/HybridizeFoldtreeDynamic.cc File Reference

A mover to dynamically manipulate fold tree during the template hybridization sampling. More...

#include <protocols/comparative_modeling/hybridize/HybridizeFoldtreeDynamic.hh>
#include <string>
#include <utility>
#include <basic/options/option.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <numeric/util.hh>
#include <numeric/xyzVector.hh>
#include <numeric/random/DistributionSampler.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <utility/vector1.hh>
#include <core/types.hh>
#include <core/import_pose/import_pose.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/scoring/rms_util.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/util.hh>
#include <protocols/loops/loops_main.hh>
#include <core/pose/symmetry/util.hh>
#include <core/conformation/symmetry/util.hh>
#include <core/optimization/symmetry/SymAtomTreeMinimizer.hh>
#include <protocols/simple_moves/symmetry/SymPackRotamersMover.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <core/util/kinematics_util.hh>
#include <core/conformation/Conformation.hh>

Namespaces

namespace  protocols
 

The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.


namespace  protocols::comparative_modeling
namespace  protocols::comparative_modeling::hybridize

Detailed Description

A mover to dynamically manipulate fold tree during the template hybridization sampling.

Detailed: based on Chris Miles's start tree builder
Author:
Yifan Song
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