Rosetta 3.4
Public Member Functions
protocols::jd2::ScoreOnlyJobOutputter Class Reference

#include <ScoreOnlyJobOutputter.hh>

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List of all members.

Public Member Functions

 ScoreOnlyJobOutputter ()
virtual void final_pose (JobCOP job, core::pose::Pose const &pose)
 this function takes a string and writes it to disk (separately from Tracer output). use some sort of extention option system - default .dat? .data?
virtual void other_pose (JobCOP job, core::pose::Pose const &pose, std::string const &tag, int copy_count=-1, bool score_only=false)
 this function is intended for saving mid-protocol poses; for example the final centroid structure in a combined centroid/fullatom protocol.
virtual bool job_has_completed (JobCOP job)
 this function is not used for output, but it belongs here since it needs to check the same output locations as the class normally writes to. This class checks wherever output goes to see if the job's expected output already exists (on disk or whatever). This is the most basic form of checkpointing.
virtual std::string output_name (JobCOP job)
 this is the master function for determining the unique output identifier for a job

Detailed Description

Joboutputter that only outputs score files, useful for screening protocols


Constructor & Destructor Documentation

protocols::jd2::ScoreOnlyJobOutputter::ScoreOnlyJobOutputter ( )

Member Function Documentation

void protocols::jd2::ScoreOnlyJobOutputter::final_pose ( JobCOP  job,
core::pose::Pose const &  pose 
) [virtual]

this function takes a string and writes it to disk (separately from Tracer output). use some sort of extention option system - default .dat? .data?

this function outputs the final result of a job.

Implements protocols::jd2::FileJobOutputter.

References protocols::jd2::FileJobOutputter::scorefile().

bool protocols::jd2::ScoreOnlyJobOutputter::job_has_completed ( JobCOP  job) [virtual]

this function is not used for output, but it belongs here since it needs to check the same output locations as the class normally writes to. This class checks wherever output goes to see if the job's expected output already exists (on disk or whatever). This is the most basic form of checkpointing.

Implements protocols::jd2::FileJobOutputter.

References output_name().

void protocols::jd2::ScoreOnlyJobOutputter::other_pose ( JobCOP  job,
core::pose::Pose const &  pose,
std::string const &  tag,
int  copy_count = -1,
bool  score_only = false 
) [virtual]

this function is intended for saving mid-protocol poses; for example the final centroid structure in a combined centroid/fullatom protocol.

Implements protocols::jd2::FileJobOutputter.

References protocols::jd2::FileJobOutputter::scorefile().

std::string protocols::jd2::ScoreOnlyJobOutputter::output_name ( JobCOP  job) [virtual]

this is the master function for determining the unique output identifier for a job

Implements protocols::jd2::FileJobOutputter.

References protocols::jd2::JobOutputter::affixed_numbered_name().

Referenced by job_has_completed().


The documentation for this class was generated from the following files:
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