Rosetta 3.4
Public Member Functions | Static Public Member Functions | Protected Member Functions
protocols::topology_broker::MetalloClaimer Class Reference

#include <MetalloClaimer.hh>

Inheritance diagram for protocols::topology_broker::MetalloClaimer:
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Collaboration diagram for protocols::topology_broker::MetalloClaimer:
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List of all members.

Public Member Functions

 MetalloClaimer ()
 ~MetalloClaimer ()
virtual TopologyClaimerOP clone () const
 clone it!
virtual void generate_sequence_claims (DofClaims &dc)
 generate claims that affect the sequence of the pose
virtual void initialize_residues (core::pose::Pose &, SequenceClaimOP init_claim, DofClaims &failed_to_init)
 mainly calls parent function... but is also used to figure out what residue number we are jumping to.
virtual void generate_claims (protocols::topology_broker::DofClaims &dc)
 generate first round of DOF claims
virtual void initialize_dofs (core::pose::Pose &pose, DofClaims const &init_claims, DofClaims &failed_to_init)
 is called after all round1 claims have been approved or retracted -- additional claims can be issued in this round
virtual std::string type () const
 type() is specifying the output name of the TopologyClaimer
virtual void add_constraints (core::pose::Pose &)
 add constraints to pose... might make this stage dependent as with movers...

Static Public Member Functions

static std::string _static_type_name ()

Protected Member Functions

virtual void set_defaults ()
virtual bool read_tag (std::string tag, std::istream &)
virtual void init_after_reading ()

Constructor & Destructor Documentation

protocols::topology_broker::MetalloClaimer::MetalloClaimer ( )

Referenced by clone().

protocols::topology_broker::MetalloClaimer::~MetalloClaimer ( ) [inline]

Member Function Documentation

static std::string protocols::topology_broker::MetalloClaimer::_static_type_name ( ) [inline, static]

Reimplemented from protocols::topology_broker::JumpClaimer.

Referenced by type().

void protocols::topology_broker::MetalloClaimer::add_constraints ( core::pose::Pose ) [virtual]

add constraints to pose... might make this stage dependent as with movers...

Reimplemented from protocols::topology_broker::TopologyClaimer.

virtual TopologyClaimerOP protocols::topology_broker::MetalloClaimer::clone ( ) const [inline, virtual]

clone it!

Reimplemented from protocols::topology_broker::JumpClaimer.

References MetalloClaimer().

virtual void protocols::topology_broker::MetalloClaimer::generate_claims ( protocols::topology_broker::DofClaims ) [inline, virtual]

generate first round of DOF claims

Reimplemented from protocols::topology_broker::JumpClaimer.

virtual void protocols::topology_broker::MetalloClaimer::generate_sequence_claims ( DofClaims ) [inline, virtual]

generate claims that affect the sequence of the pose

Reimplemented from protocols::topology_broker::SequenceClaimer.

void protocols::topology_broker::MetalloClaimer::init_after_reading ( ) [protected, virtual]
virtual void protocols::topology_broker::MetalloClaimer::initialize_dofs ( core::pose::Pose pose,
DofClaims const &  init_claims,
DofClaims failed_to_init 
) [inline, virtual]

is called after all round1 claims have been approved or retracted -- additional claims can be issued in this round

Reimplemented from protocols::topology_broker::JumpClaimer.

void protocols::topology_broker::MetalloClaimer::initialize_residues ( core::pose::Pose pose,
SequenceClaimOP  init_claim,
DofClaims failed_to_init 
) [virtual]

mainly calls parent function... but is also used to figure out what residue number we are jumping to.

Reimplemented from protocols::topology_broker::SequenceClaimer.

References protocols::topology_broker::TopologyClaimer::broker(), protocols::topology_broker::JumpClaimer::new_decoy(), protocols::topology_broker::TopologyBroker::resolve_residue(), and tr().

bool protocols::topology_broker::MetalloClaimer::read_tag ( std::string  tag,
std::istream &  is 
) [protected, virtual]
void protocols::topology_broker::MetalloClaimer::set_defaults ( ) [protected, virtual]
virtual std::string protocols::topology_broker::MetalloClaimer::type ( ) const [inline, virtual]

type() is specifying the output name of the TopologyClaimer

Reimplemented from protocols::topology_broker::JumpClaimer.

References _static_type_name().


The documentation for this class was generated from the following files:
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