Rosetta 3.4
Public Member Functions
protocols::simple_filters::AlaScan Class Reference

#include <AlaScan.hh>

Inheritance diagram for protocols::simple_filters::AlaScan:
Inheritance graph
[legend]
Collaboration diagram for protocols::simple_filters::AlaScan:
Collaboration graph
[legend]

List of all members.

Public Member Functions

 AlaScan ()
 AlaScan (bool const chain1, bool const chain2, core::Size const repeats, core::Real const dist, core::scoring::ScoreFunctionCOP scorefxn, core::Size const jump, bool const symmetry)
bool apply (core::pose::Pose const &) const
 Returns true if the given pose passes the filter, false otherwise.
filters::FilterOP clone () const
filters::FilterOP fresh_instance () const
void report (std::ostream &out, core::pose::Pose const &pose) const
void report_symmetry (std::ostream &out, core::pose::Pose const &pose) const
core::Real report_sm (core::pose::Pose const &) const
 used to report filter internals through a score or silent file
void chain1 (bool const c1)
void chain2 (bool const c2)
void dist (core::Real const d)
void scorefxn (core::scoring::ScoreFunctionOP scorefxn)
core::Real ddG_for_single_residue (core::pose::Pose const &pose, core::Size const resi) const
bool chain1 () const
bool chain2 () const
core::Size repeats () const
void repeats (core::Size const r)
core::Size jump () const
void jump (core::Size const j)
core::Real dist () const
virtual ~AlaScan ()
void repack (bool const repack)
bool repack () const
void parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)

Constructor & Destructor Documentation

protocols::simple_filters::AlaScan::AlaScan ( ) [inline]

Referenced by clone(), and fresh_instance().

protocols::simple_filters::AlaScan::AlaScan ( bool const  chain1,
bool const  chain2,
core::Size const  repeats,
core::Real const  dist,
core::scoring::ScoreFunctionCOP  scorefxn,
core::Size const  jump = 1,
bool const  symmetry = false 
)
protocols::simple_filters::AlaScan::~AlaScan ( ) [virtual]

Member Function Documentation

bool protocols::simple_filters::AlaScan::apply ( core::pose::Pose const &  pose) const [inline, virtual]

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

void protocols::simple_filters::AlaScan::chain1 ( bool const  c1) [inline]
bool protocols::simple_filters::AlaScan::chain1 ( ) const [inline]
void protocols::simple_filters::AlaScan::chain2 ( bool const  c2) [inline]
bool protocols::simple_filters::AlaScan::chain2 ( ) const [inline]
filters::FilterOP protocols::simple_filters::AlaScan::clone ( ) const [inline, virtual]

Implements protocols::filters::Filter.

References AlaScan().

core::Real protocols::simple_filters::AlaScan::ddG_for_single_residue ( core::pose::Pose const &  pose,
core::Size const  resi 
) const
void protocols::simple_filters::AlaScan::dist ( core::Real const  d) [inline]
core::Real protocols::simple_filters::AlaScan::dist ( ) const [inline]
filters::FilterOP protocols::simple_filters::AlaScan::fresh_instance ( ) const [inline, virtual]

Implements protocols::filters::Filter.

References AlaScan().

core::Size protocols::simple_filters::AlaScan::jump ( ) const [inline]
void protocols::simple_filters::AlaScan::jump ( core::Size const  j) [inline]
void protocols::simple_filters::AlaScan::parse_my_tag ( utility::tag::TagPtr const  tag,
protocols::moves::DataMap data,
filters::Filters_map const &  ,
protocols::moves::Movers_map const &  ,
core::pose::Pose const &   
) [virtual]
bool protocols::simple_filters::AlaScan::repack ( ) const
void protocols::simple_filters::AlaScan::repack ( bool const  repack)
core::Size protocols::simple_filters::AlaScan::repeats ( ) const [inline]
void protocols::simple_filters::AlaScan::repeats ( core::Size const  r) [inline]
void protocols::simple_filters::AlaScan::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const [virtual]
core::Real protocols::simple_filters::AlaScan::report_sm ( core::pose::Pose const &  ) const [inline, virtual]

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

void protocols::simple_filters::AlaScan::report_symmetry ( std::ostream &  out,
core::pose::Pose const &  pose 
) const
void protocols::simple_filters::AlaScan::scorefxn ( core::scoring::ScoreFunctionOP  scorefxn)

The documentation for this class was generated from the following files:
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Defines