Rosetta 3.4
Public Member Functions
protocols::simple_filters::AtomicContactFilter Class Reference

detects atomic (<4Ang) contacts between any two atoms of two residues More...

#include <AtomicContactFilter.hh>

Inheritance diagram for protocols::simple_filters::AtomicContactFilter:
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Collaboration diagram for protocols::simple_filters::AtomicContactFilter:
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List of all members.

Public Member Functions

 AtomicContactFilter ()
 default ctor
 AtomicContactFilter (core::Size const res1, core::Size const res2, core::Real const distance=4.0, bool const sidechain=1, bool const backbone=0, bool const protons=0)
 Constructor with a single target residue.
virtual bool apply (core::pose::Pose const &pose) const
core::Real compute (core::pose::Pose const &pose) const
virtual void report (std::ostream &out, core::pose::Pose const &pose) const
virtual core::Real report_sm (core::pose::Pose const &pose) const
 used to report filter internals through a score or silent file
virtual filters::FilterOP clone () const
virtual filters::FilterOP fresh_instance () const
virtual ~AtomicContactFilter ()
void parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)

Detailed Description

detects atomic (<4Ang) contacts between any two atoms of two residues


Constructor & Destructor Documentation

protocols::simple_filters::AtomicContactFilter::AtomicContactFilter ( )
protocols::simple_filters::AtomicContactFilter::AtomicContactFilter ( core::Size const  res1,
core::Size const  res2,
core::Real const  distance = 4.0,
bool const  sidechain = 1,
bool const  backbone = 0,
bool const  protons = 0 
)

Constructor with a single target residue.

virtual protocols::simple_filters::AtomicContactFilter::~AtomicContactFilter ( ) [inline, virtual]

Member Function Documentation

bool protocols::simple_filters::AtomicContactFilter::apply ( core::pose::Pose const &  pose) const [virtual]
Returns:
Whether a disulfide bond is possible between any of the targets

Implements protocols::filters::Filter.

References compute(), report(), and protocols::simple_filters::TR().

virtual filters::FilterOP protocols::simple_filters::AtomicContactFilter::clone ( ) const [inline, virtual]
core::Real protocols::simple_filters::AtomicContactFilter::compute ( core::pose::Pose const &  pose) const
virtual filters::FilterOP protocols::simple_filters::AtomicContactFilter::fresh_instance ( ) const [inline, virtual]
void protocols::simple_filters::AtomicContactFilter::parse_my_tag ( utility::tag::TagPtr const  tag,
protocols::moves::DataMap ,
protocols::filters::Filters_map const &  ,
protocols::moves::Movers_map const &  ,
core::pose::Pose const &  pose 
) [virtual]
void protocols::simple_filters::AtomicContactFilter::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const [virtual]

Reimplemented from protocols::filters::Filter.

References compute(), and protocols::moves::ResId::get_resid().

Referenced by apply().

core::Real protocols::simple_filters::AtomicContactFilter::report_sm ( core::pose::Pose const &  ) const [virtual]

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References compute().


The documentation for this class was generated from the following files:
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