Rosetta 3.4
Namespaces | Functions
src/protocols/match/BumpGrid.cc File Reference
#include <protocols/match/BumpGrid.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/AtomTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>

Namespaces

namespace  protocols
 

The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.


namespace  protocols::match

Functions

static basic::Tracer protocols::match::TR ("protocols.BumpGrid")
utility::vector1< ProbeRadius > protocols::match::initialize_atomtype_2_probe_radius_map ()
ProbeRadius protocols::match::probe_radius_for_atom_type (core::Size atomtype)
BumpGridOP protocols::match::bump_grid_to_enclose_pose (core::pose::Pose const &pose)
BumpGridOP protocols::match::bump_grid_to_enclose_residue_backbone (core::conformation::Residue const &residue, BumpGrid const &original_grid)
 Construct a BumpGrid that encloses the backbone atoms for a single residue. Use the original_grid as a starting point, copying over all pertinent data such that the two grids can later be merged together.
BumpGridOP protocols::match::bump_grid_to_enclose_residue (core::conformation::Residue const &residue, BumpGrid const &original_grid)
 Construct a BumpGrid that encloses a single residue. Use the original_grid as a starting point, copying over all pertinent data such that the two grids can later be merged together.
void protocols::match::fill_grid_with_residue_spheres (core::conformation::Residue const &residue, BumpGrid &grid)
void protocols::match::fill_grid_with_residue_heavyatom_spheres (core::conformation::Residue const &residue, BumpGrid &grid)
void protocols::match::fill_grid_with_backbone_heavyatom_spheres (core::conformation::Residue const &residue, BumpGrid &grid)

Detailed Description

Author:
Alex Zanghellini (zanghell@u.washington.edu)
Andrew Leaver-Fay (aleaverfay@gmail.com), porting to mini
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