Rosetta 3.4
Public Member Functions
protocols::frag_picker::scores::PCS_FragDistance Class Reference

scores a fragment by the root mean square deviation of Phi and Psi angles. More...

#include <PCS_FragDistance.hh>

Inheritance diagram for protocols::frag_picker::scores::PCS_FragDistance:
Inheritance graph
Collaboration diagram for protocols::frag_picker::scores::PCS_FragDistance:
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List of all members.

Public Member Functions

 PCS_FragDistance (Size priority, Real lowest_acceptable_value, bool use_lowest, ObjexxFCL::FArray2D_double target_ca_dev, ObjexxFCL::FArray2D_double target_ca_dist, Size largest_fragment, Size max_length)
 creates a Calpha distance based scoring function.
void do_caching (VallChunkOP)
void clean_up ()
bool score (FragmentCandidateOP, FragmentScoreMapOP)
bool cached_score (FragmentCandidateOP, FragmentScoreMapOP)

Detailed Description

scores a fragment by the root mean square deviation of Phi and Psi angles.

Constructor & Destructor Documentation

protocols::frag_picker::scores::PCS_FragDistance::PCS_FragDistance ( Size  priority,
Real  lowest_acceptable_value,
bool  use_lowest,
ObjexxFCL::FArray2D_double  target_ca_dev,
ObjexxFCL::FArray2D_double  target_ca_dist,
Size  largest_fragment,
Size  max_length 

creates a Calpha distance based scoring function.

Detailed: Scores distance matches for short range disulfides (ie: within fragment)

Member Function Documentation

bool protocols::frag_picker::scores::PCS_FragDistance::cached_score ( FragmentCandidateOP  fragment,
FragmentScoreMapOP  scores 
) [virtual]
void protocols::frag_picker::scores::PCS_FragDistance::clean_up ( ) [virtual]
void protocols::frag_picker::scores::PCS_FragDistance::do_caching ( VallChunkOP  current_chunk) [virtual]
bool protocols::frag_picker::scores::PCS_FragDistance::score ( FragmentCandidateOP  fragment,
FragmentScoreMapOP  scores 
) [virtual]

The documentation for this class was generated from the following files:
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