Rosetta 3.4
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scores a fragment by the root mean square deviation of Phi and Psi angles. More...
#include <PCS_FragDistance.hh>
Public Member Functions | |
PCS_FragDistance (Size priority, Real lowest_acceptable_value, bool use_lowest, ObjexxFCL::FArray2D_double target_ca_dev, ObjexxFCL::FArray2D_double target_ca_dist, Size largest_fragment, Size max_length) | |
creates a Calpha distance based scoring function. | |
void | do_caching (VallChunkOP) |
void | clean_up () |
bool | score (FragmentCandidateOP, FragmentScoreMapOP) |
bool | cached_score (FragmentCandidateOP, FragmentScoreMapOP) |
protocols::frag_picker::scores::PCS_FragDistance::PCS_FragDistance | ( | Size | priority, |
Real | lowest_acceptable_value, | ||
bool | use_lowest, | ||
ObjexxFCL::FArray2D_double | target_ca_dev, | ||
ObjexxFCL::FArray2D_double | target_ca_dist, | ||
Size | largest_fragment, | ||
Size | max_length | ||
) |
creates a Calpha distance based scoring function.
bool protocols::frag_picker::scores::PCS_FragDistance::cached_score | ( | FragmentCandidateOP | fragment, |
FragmentScoreMapOP | scores | ||
) | [virtual] |
Reimplemented from protocols::frag_picker::scores::CachingScoringMethod.
References do_caching(), protocols::frag_picker::scores::FragmentScoringMethod::id_, protocols::frag_picker::scores::FragmentScoringMethod::lowest_acceptable_value_, score(), and protocols::frag_picker::scores::FragmentScoringMethod::use_lowest_.
Referenced by score().
void protocols::frag_picker::scores::PCS_FragDistance::clean_up | ( | ) | [virtual] |
void protocols::frag_picker::scores::PCS_FragDistance::do_caching | ( | VallChunkOP | current_chunk | ) | [virtual] |
Implements protocols::frag_picker::scores::CachingScoringMethod.
References core::kinematics::distance().
Referenced by cached_score().
bool protocols::frag_picker::scores::PCS_FragDistance::score | ( | FragmentCandidateOP | fragment, |
FragmentScoreMapOP | scores | ||
) | [virtual] |
Reimplemented from protocols::frag_picker::scores::CachingScoringMethod.
References cached_score().
Referenced by cached_score().