Rosetta 3.4
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src/core/pose/symmetry/util.hh File Reference

utility functions for handling with symmetric conformations More...

#include <core/scoring/Energies.fwd.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/conformation/symmetry/SymmData.fwd.hh>
#include <core/conformation/symmetry/SymmetryInfo.fwd.hh>
#include <core/kinematics/MoveMap.fwd.hh>
#include <core/kinematics/FoldTree.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/pose/PDBInfo.fwd.hh>
#include <core/types.hh>
#include <utility/vector1.hh>
#include <string>

Namespaces

namespace  core
 

A class for defining atom parameters, known as atom_types.


namespace  core::pose
namespace  core::pose::symmetry

Functions

bool core::pose::symmetry::is_symmetric (pose::Pose const &pose)
bool core::pose::symmetry::is_symmetric (scoring::ScoreFunction const &scorefxn)
bool core::pose::symmetry::is_symmetric (scoring::Energies const &energies)
conformation::symmetry::SymmetryInfoCOP core::pose::symmetry::symmetry_info (pose::Pose const &pose)
void core::pose::symmetry::make_symmetric_pose (pose::Pose &pose, conformation::symmetry::SymmetryInfo symmetry_info)
void core::pose::symmetry::make_symmetric_pose (pose::Pose &pose, conformation::symmetry::SymmData &symmdata)
void core::pose::symmetry::make_symmetric_pose (pose::Pose &pose, std::string symmdef_file)
void core::pose::symmetry::make_asymmetric_pose (pose::Pose &pose)
void core::pose::symmetry::extract_asymmetric_unit (core::pose::Pose const &pose_in, core::pose::Pose &pose_out)
 extract the asu from a pose... unlike previous function symmetric clones are thrown out
core::pose::Pose core::pose::symmetry::get_asymmetric_pose_copy_from_symmetric_pose (pose::Pose const &pose)
void core::pose::symmetry::make_symmetric_pdb_info (pose::Pose const &pose, pose::PDBInfoOP pdb_info_src, pose::PDBInfoOP pdb_info_target)
void core::pose::symmetry::extract_asymmetric_unit_pdb_info (pose::Pose const &pose, pose::PDBInfoCOP pdb_info_src, pose::PDBInfoOP pdb_info_target)
void core::pose::symmetry::make_symmetric_movemap (pose::Pose const &pose, kinematics::MoveMap &movemap)
int core::pose::symmetry::find_symmetric_basejump_anchor (pose::Pose &pose)
void core::pose::symmetry::find_new_symmetric_jump_residues (core::pose::Pose &pose)
void core::pose::symmetry::rotate_anchor_to_x_axis (core::pose::Pose &pose)
numeric::xyzVector< core::Realcore::pose::symmetry::get_symm_axis (core::pose::Pose &pose)
void core::pose::symmetry::symmetrize_fold_tree (core::pose::Pose const &p, kinematics::FoldTree &f)
void core::pose::symmetry::set_asymm_unit_fold_tree (core::pose::Pose &p, kinematics::FoldTree const &f)
void core::pose::symmetry::make_residue_mask_symmetric (core::pose::Pose const &p, utility::vector1< bool > &msk)
kinematics::FoldTree core::pose::symmetry::sealed_symmetric_fold_tree (core::pose::Pose &pose)

Detailed Description

utility functions for handling with symmetric conformations

utility functions for handling of symmetric conformations

Author:
Ingemar Andre
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