#include <SetupNCSMover.hh>

Inheritance diagram for protocols::simple_moves::symmetry::SetupNCSMover:

Collaboration diagram for protocols::simple_moves::symmetry::SetupNCSMover:

Public Member Functions
	SetupNCSMover ()
	SetupNCSMover (std::string src, std::string tgt)
	SetupNCSMover (std::string src, utility::vector1< std::string > tgt)
	SetupNCSMover (utility::vector1< std::string > src, utility::vector1< std::string > tgt)
	~SetupNCSMover ()
void	add_group (std::string src, std::string tgt)
void	add_groupE (std::string src, std::string tgt)
void	set_defaults ()
moves::MoverOP	clone () const
	clone has to be overridden only if clone invocation is expected.
virtual void	apply (core::pose::Pose &pose)
virtual void	parse_my_tag (utility::tag::TagPtr const tag, moves::DataMap &data, filters::Filters_map const &filters, moves::Movers_map const &movers, core::pose::Pose const &pose)
	Called by MoverFactory when constructing new Movers. Takes care of the specific mover's parsing.
virtual std::string	get_name () const
	Each derived class must specify its name. The class name.
void	set_bb (bool bb_in)
bool	bb ()
void	set_chi (bool chi_in)
bool	chi ()
void	set_symmetric_sequence (bool symmetric_sequence_in)
bool	symmetric_sequence ()
void	set_limit (core::Real limit_in)
core::Real	limit ()
void	set_weight (core::Real wt_in)
core::Real	weight ()

Constructor & Destructor Documentation

protocols::simple_moves::symmetry::SetupNCSMover::SetupNCSMover ( )

References set_defaults().

Referenced by clone().

protocols::simple_moves::symmetry::SetupNCSMover::SetupNCSMover	(	std::string	src,
		std::string	tgt
	)

References add_group(), and set_defaults().

protocols::simple_moves::symmetry::SetupNCSMover::SetupNCSMover	(	std::string	src,
		utility::vector1< std::string >	tgt
	)

References add_group(), and set_defaults().

protocols::simple_moves::symmetry::SetupNCSMover::SetupNCSMover	(	utility::vector1< std::string >	src,
		utility::vector1< std::string >	tgt
	)

References add_group(), and set_defaults().

protocols::simple_moves::symmetry::SetupNCSMover::~SetupNCSMover ( )

Member Function Documentation

void protocols::simple_moves::symmetry::SetupNCSMover::add_group	(	std::string	src,
		std::string	tgt
	)

Referenced by protocols::forge::remodel::RemodelMover::apply(), parse_my_tag(), and SetupNCSMover().

void protocols::simple_moves::symmetry::SetupNCSMover::add_groupE	(	std::string	src,
		std::string	tgt
	)

Referenced by parse_my_tag().

void protocols::simple_moves::symmetry::SetupNCSMover::apply ( core::pose::Pose & pose ) [virtual]

Implements protocols::moves::Mover.

References core::conformation::Residue::aa(), core::pose::Pose::add_constraint(), core::id::BB, core::id::CHI, core::pose::Pose::conformation(), protocols::rosetta_scripts::get_resnum_list_ordered(), core::conformation::Conformation::get_torsion_angle_atom_ids(), core::conformation::Residue::mainchain_torsions(), core::conformation::Residue::nchi(), core::pose::Pose::replace_residue(), core::pose::Pose::residue(), and protocols::simple_moves::symmetry::TZ().

Referenced by protocols::forge::remodel::RemodelMover::apply().

bool protocols::simple_moves::symmetry::SetupNCSMover::bb ( ) [inline]

bool protocols::simple_moves::symmetry::SetupNCSMover::chi ( ) [inline]

moves::MoverOP protocols::simple_moves::symmetry::SetupNCSMover::clone ( ) const [inline, virtual]

clone has to be overridden only if clone invocation is expected.

clone is meant to return an OP'ed deep copy of this object. This really should be a pure virtual in the base class, but adding pure virtuals to Mover would massively disrupt the code. This default implementation crashes at runtime instead of compiletime if you try to call it. If this code is causing you problems, your Mover needs to override this function.

Reimplemented from protocols::moves::Mover.

References SetupNCSMover().

std::string protocols::simple_moves::symmetry::SetupNCSMover::get_name ( ) const [virtual]

Each derived class must specify its name. The class name.

Implements protocols::moves::Mover.

References protocols::simple_moves::symmetry::SetupNCSMoverCreator::mover_name().

core::Real protocols::simple_moves::symmetry::SetupNCSMover::limit ( ) [inline]

void protocols::simple_moves::symmetry::SetupNCSMover::parse_my_tag	(	utility::tag::TagPtr const	tag,
		moves::DataMap &	data,
		filters::Filters_map const &	filters,
		moves::Movers_map const &	movers,
		core::pose::Pose const &	pose
	)		`[virtual]`

Called by MoverFactory when constructing new Movers. Takes care of the specific mover's parsing.

Some movers need not be parsed, so we shouldn't stop executions. This, however, calls attention to the lack of this method, which could be due to something as silly as a wrong parameters definition.

Reimplemented from protocols::moves::Mover.

References add_group(), add_groupE(), and protocols::simple_moves::symmetry::TZ().

void protocols::simple_moves::symmetry::SetupNCSMover::set_bb ( bool bb_in ) [inline]

void protocols::simple_moves::symmetry::SetupNCSMover::set_chi ( bool chi_in ) [inline]

void protocols::simple_moves::symmetry::SetupNCSMover::set_defaults ( )

Referenced by SetupNCSMover().

void protocols::simple_moves::symmetry::SetupNCSMover::set_limit ( core::Real limit_in ) [inline]

void protocols::simple_moves::symmetry::SetupNCSMover::set_symmetric_sequence ( bool symmetric_sequence_in ) [inline]

void protocols::simple_moves::symmetry::SetupNCSMover::set_weight ( core::Real wt_in ) [inline]

bool protocols::simple_moves::symmetry::SetupNCSMover::symmetric_sequence ( ) [inline]

core::Real protocols::simple_moves::symmetry::SetupNCSMover::weight ( ) [inline]

The documentation for this class was generated from the following files:

src/protocols/simple_moves/symmetry/SetupNCSMover.hh
src/protocols/simple_moves/symmetry/SetupNCSMover.cc

Public Member Functions

Constructor & Destructor Documentation

Member Function Documentation