, including all inherited members.
| _static_type_name() | protocols::topology_broker::TemplateJumpClaimer | [inline, static] |
| accept_declined_claim(DofClaim const &was_declined) | protocols::topology_broker::FragmentClaimer | [virtual] |
| add_constraints(core::pose::Pose &) | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| add_mover(moves::RandomMover &, core::pose::Pose const &, abinitio::StageID, core::scoring::ScoreFunction const &, core::Real) | protocols::topology_broker::TopologyClaimer | [virtual] |
| adjust_relax_movemap(core::kinematics::MoveMap &) const | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| allow_claim(DofClaim const &) | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| broker() const | protocols::topology_broker::TopologyClaimer | [inline] |
| claim_accepted(DofClaimOP my_claim) | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| clone() const | protocols::topology_broker::TemplateJumpClaimer | [inline, virtual] |
| finalize_claims(DofClaims &) | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| FragmentClaimer() | protocols::topology_broker::FragmentClaimer | |
| FragmentClaimer(simple_moves::FragmentMoverOP, std::string mover_tag, weights::AbinitioMoverWeightOP weight) | protocols::topology_broker::FragmentClaimer | |
| FragmentClaimer(simple_moves::FragmentMoverOP) | protocols::topology_broker::FragmentClaimer | |
| FragmentClaimer(FragmentClaimer const &src) | protocols::topology_broker::FragmentClaimer | |
| generate_claims(DofClaims &) | protocols::topology_broker::JumpClaimer | [virtual] |
| generate_sequence_claims(DofClaims &) | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| get_frag_mover_ptr() | protocols::topology_broker::FragmentClaimer | [protected] |
| get_mover(core::pose::Pose const &) const | protocols::topology_broker::FragmentClaimer | [virtual] |
| get_sequence_region(std::set< core::Size > &start_region) const | protocols::topology_broker::FragmentClaimer | |
| init_after_reading() | protocols::topology_broker::TemplateJumpClaimer | [protected, virtual] |
| init_jumps() | protocols::topology_broker::JumpClaimer | [protected] |
| initialize_dofs(core::pose::Pose &, DofClaims const &init_claims, DofClaims &failed_to_init) | protocols::topology_broker::JumpClaimer | [virtual] |
| initialize_residues(core::pose::Pose &, SequenceClaimOP init_claim, DofClaims &failed_to_init) | protocols::topology_broker::TopologyClaimer | [virtual] |
| jump_def() | protocols::topology_broker::JumpClaimer | [inline, protected] |
| JumpClaimer() | protocols::topology_broker::JumpClaimer | |
| JumpClaimer(jumping::BaseJumpSetupOP jump_def, std::string const &mover_tag="JumpMove", weights::AbinitioMoverWeightOP weight=NULL) | protocols::topology_broker::JumpClaimer | |
| JumpClaimer(JumpClaimer const &src) | protocols::topology_broker::JumpClaimer | |
| label() const | protocols::topology_broker::TopologyClaimer | [inline] |
| loop_frags(core::kinematics::MoveMap &) const | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| manipulate_cut_bias(utility::vector1< core::Real > &) | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| movemap_ | protocols::topology_broker::FragmentClaimer | [protected] |
| mover() const | protocols::topology_broker::FragmentClaimer | [inline, protected] |
| mover_tag() const | protocols::topology_broker::FragmentClaimer | [inline] |
| mover_weight() | protocols::topology_broker::TopologyClaimer | [inline] |
| new_decoy(core::pose::Pose const &) | protocols::topology_broker::JumpClaimer | [virtual] |
| new_decoy() | protocols::topology_broker::JumpClaimer | [virtual] |
| passes_filter(core::pose::Pose const &, abinitio::StageID, core::Real, std::ostringstream &) | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| read(std::istream &) | protocols::topology_broker::TopologyClaimer | [virtual] |
| read_config_file(std::string const &file) | protocols::topology_broker::TemplateJumpClaimer | |
| read_mover_weight(std::istream &is) | protocols::topology_broker::TopologyClaimer | |
| read_tag(std::string tag, std::istream &is) | protocols::topology_broker::TemplateJumpClaimer | [protected, virtual] |
| read_topol_file(std::string const &file) | protocols::topology_broker::TemplateJumpClaimer | |
| receive_message(ClaimerMessage &) | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| set_bInitDofs(bool set) | protocols::topology_broker::FragmentClaimer | [inline] |
| set_broker(TopologyBrokerCAP ptr) | protocols::topology_broker::TopologyClaimer | [inline] |
| set_claim_right(DofClaim::ClaimRight setting) | protocols::topology_broker::FragmentClaimer | [inline, protected] |
| set_defaults() | protocols::topology_broker::TopologyClaimer | [protected, virtual] |
| set_jump_def(jumping::BaseJumpSetupOP jump_def) | protocols::topology_broker::JumpClaimer | [inline, protected] |
| set_keep_jumps_from_input_pose(bool setting) | protocols::topology_broker::JumpClaimer | [inline, protected] |
| set_label(std::string const &str) | protocols::topology_broker::TopologyClaimer | [inline] |
| set_mover(simple_moves::FragmentMoverOP mover) | protocols::topology_broker::FragmentClaimer | |
| set_mover_tag(std::string const &str) | protocols::topology_broker::FragmentClaimer | |
| set_mover_weight(weights::AbinitioMoverWeightOP wset) | protocols::topology_broker::TopologyClaimer | [inline] |
| switch_to_fullatom(core::pose::Pose &, utility::vector1< bool >) const | protocols::topology_broker::TopologyClaimer | [inline, virtual] |
| TemplateJumpClaimer() | protocols::topology_broker::TemplateJumpClaimer | |
| TemplateJumpClaimer(std::string config_file, weights::AbinitioMoverWeightOP weight=NULL) | protocols::topology_broker::TemplateJumpClaimer | |
| TopologyClaimer() | protocols::topology_broker::TopologyClaimer | [inline] |
| TopologyClaimer(weights::AbinitioMoverWeightOP weight) | protocols::topology_broker::TopologyClaimer | [inline] |
| type() const | protocols::topology_broker::TemplateJumpClaimer | [inline, virtual] |
| ~FragmentClaimer() | protocols::topology_broker::FragmentClaimer | |
| ~JumpClaimer() | protocols::topology_broker::JumpClaimer | |
1.7.4
