src/core/kinematics/tree/Atom.hh File Reference

Kinematics Atom interface class. More...

#include <core/kinematics/tree/Atom.fwd.hh>
#include <core/id/AtomID.fwd.hh>
#include <core/id/AtomID_Mask.fwd.hh>
#include <core/kinematics/AtomPointer.fwd.hh>
#include <core/kinematics/AtomWithDOFChange.fwd.hh>
#include <core/kinematics/Jump.fwd.hh>
#include <core/kinematics/Stub.fwd.hh>
#include <core/kinematics/DomainMap.fwd.hh>
#include <core/kinematics/ResidueCoordinateChangeList.fwd.hh>
#include <core/kinematics/MinimizerMapBase.fwd.hh>
#include <core/id/DOF_ID.fwd.hh>
#include <core/id/DOF_ID_Mask.fwd.hh>
#include <numeric/xyzMatrix.fwd.hh>
#include <ObjexxFCL/FArray1D.fwd.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <core/id/types.hh>
#include <utility/vector0_bool.hh>

Classes
class	core::kinematics::tree::Atom
	Kinematics Atom interface class. More...
Namespaces
namespace	core
	A class for defining atom parameters, known as atom_types.
namespace	core::kinematics
	See AtomTree overview and FoldTree overview for details.
namespace	core::kinematics::tree
Functions
Length	core::kinematics::tree::distance (Atom const &atom1, Atom const &atom2)
	Distance between two Atoms.
Length	core::kinematics::tree::distance_squared (Atom const &atom1, Atom const &atom2)
	Distance squared between two Atoms.

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Detailed Description

Kinematics Atom interface class.

Author:

Phil Bradley