, including all inherited members.
add_fragments(core::fragment::FragSetOP fragset) | protocols::loops::loop_mover::LoopMover | |
apply(core::pose::Pose &pose) | protocols::loops::loop_mover::IndependentLoopMover | [virtual] |
clear_fragments() | protocols::loops::loop_mover::LoopMover | |
clear_info() | protocols::moves::Mover | [inline, virtual] |
clone() const | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | [virtual] |
enforce_false_movemap(MoveMapOP &mm) const | protocols::loops::loop_mover::LoopMover | [protected] |
false_movemap() const | protocols::loops::loop_mover::LoopMover | |
false_movemap(MoveMapOP const &mm) | protocols::loops::loop_mover::LoopMover | |
Filters_map typedef | protocols::moves::Mover | |
frag_libs() const | protocols::loops::loop_mover::LoopMover | |
fresh_instance() const | protocols::moves::Mover | [virtual] |
get_accept_aborted_loops() const | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
get_additional_output() | protocols::moves::Mover | [virtual] |
get_all_loops_closed() const | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
get_build_all_loops() const | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
get_build_attempts() const | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
get_checkpoints() | protocols::loops::loop_mover::LoopMover | |
get_current_job() const | protocols::moves::Mover | |
get_current_tag() const | protocols::moves::Mover | [inline] |
get_grow_attempts() const | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
get_input_pose() const | protocols::moves::Mover | |
get_last_move_status() const | protocols::moves::Mover | |
get_loop_combine_rate() const | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
get_name() const | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | [virtual] |
get_native_pose() const | protocols::moves::Mover | |
get_random_order() const | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
get_strict_loops() const | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
get_type() const | protocols::moves::Mover | [inline] |
IndependentLoopMover() | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
IndependentLoopMover(protocols::loops::LoopsOP loops_in) | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
info() | protocols::moves::Mover | [inline, virtual] |
info() const | protocols::moves::Mover | [inline, virtual] |
last_proposal_density_ratio() | protocols::moves::Mover | [inline, virtual] |
LoopMover() | protocols::loops::loop_mover::LoopMover | |
LoopMover(protocols::loops::LoopsOP loops_in) | protocols::loops::loop_mover::LoopMover | |
LoopMover(LoopMover const &rhs) | protocols::loops::loop_mover::LoopMover | |
LoopMover_Perturb_QuickCCD() | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | |
LoopMover_Perturb_QuickCCD(protocols::loops::LoopsOP loops_in) | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | |
LoopMover_Perturb_QuickCCD(protocols::loops::LoopsOP loops_in, core::scoring::ScoreFunctionOP scorefxn) | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | |
LoopMover_Perturb_QuickCCD(protocols::loops::LoopsOP loops_in, core::scoring::ScoreFunctionOP scorefxn, core::fragment::FragSetOP fragset) | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | |
loops(protocols::loops::LoopsOP const l) | protocols::loops::loop_mover::LoopMover | |
loops() const | protocols::loops::loop_mover::LoopMover | |
model_loop(core::pose::Pose &pose, protocols::loops::Loop const &loop) | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | [protected, virtual] |
MoveMapOP typedef | protocols::loops::loop_mover::LoopMover | |
Mover() | protocols::moves::Mover | |
Mover(std::string const &type_name) | protocols::moves::Mover | |
Mover(Mover const &other) | protocols::moves::Mover | |
operator=(LoopMover const &rhs) | protocols::loops::loop_mover::LoopMover | |
protocols::moves::Mover::operator=(Mover const &other) | protocols::moves::Mover | |
parse_my_tag(TagPtr const tag, DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | [virtual] |
Pose typedef | protocols::moves::Mover | |
PoseCOP typedef | protocols::moves::Mover | |
randomize_loop() const | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | [inline] |
randomize_loop(bool const flag) | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | [inline] |
randomize_loop_ | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | [protected] |
register_options() | protocols::moves::Mover | [inline, static] |
reinitialize_for_each_job() const | protocols::moves::Mover | [virtual] |
reinitialize_for_new_input() const | protocols::moves::Mover | [virtual] |
reset_status() | protocols::moves::Mover | |
scorefxn() const | protocols::loops::loop_mover::LoopMover | |
set_accept_aborted_loops_(bool value) | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
set_build_all_loops_(bool value) | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
set_build_attempts_(int value) | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
set_current_tag(std::string const &new_tag) | protocols::moves::Mover | [inline] |
set_default_settings() | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | [inline] |
set_defaults() | protocols::loops::loop_mover::IndependentLoopMover | |
set_extended_torsions(core::pose::Pose &pose, Loop const &loop) | protocols::loops::loop_mover::LoopMover | [virtual] |
set_grow_attempts_(int value) | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
set_input_pose(PoseCOP pose) | protocols::moves::Mover | [virtual] |
set_last_move_status(MoverStatus status) | protocols::moves::Mover | [protected] |
set_loop_combine_rate_(core::Real value) | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
set_loops_from_pose_observer_cache(core::pose::Pose const &pose) | protocols::loops::loop_mover::LoopMover | [protected] |
set_native_pose(PoseCOP pose) | protocols::moves::Mover | [virtual] |
set_random_order_(bool value) | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
set_scorefxn(const core::scoring::ScoreFunctionOP score_in) | protocols::loops::loop_mover::LoopMover | |
set_strict_loops(bool value) | protocols::loops::loop_mover::IndependentLoopMover | [inline] |
set_use_loops_from_observer_cache(bool const loops_from_observer_cache) | protocols::loops::loop_mover::LoopMover | [protected] |
Strings typedef | protocols::moves::Mover | |
TagPtr typedef | protocols::moves::Mover | |
test_move(Pose &pose) | protocols::moves::Mover | [inline, virtual] |
tr() const | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | [protected, virtual] |
type() const | protocols::moves::Mover | [inline] |
type(const std::string &type_in) | protocols::moves::Mover | [inline] |
use_loops_from_observer_cache() const | protocols::loops::loop_mover::LoopMover | [protected] |
~IndependentLoopMover() | protocols::loops::loop_mover::IndependentLoopMover | [virtual] |
~LoopMover() | protocols::loops::loop_mover::LoopMover | [virtual] |
~LoopMover_Perturb_QuickCCD() | protocols::loops::loop_mover::perturb::LoopMover_Perturb_QuickCCD | |
~Mover() | protocols::moves::Mover | [virtual] |