Rosetta 3.4
Public Member Functions
core::scoring::methods::BurialEnergy Class Reference

#include <BurialEnergy.hh>

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List of all members.

Public Member Functions

 BurialEnergy ()
virtual EnergyMethodOP clone () const
 clone
virtual void residue_energy (conformation::Residue const &rsd, pose::Pose const &pose, EnergyMap &emap) const
 Evaluate the one-body energies for a particular residue, in the context of a given Pose, and increment those energies in the input Emap (do not overwrite them).
void setup_for_scoring (pose::Pose &pose, ScoreFunction const &) const
void finalize_total_energy (pose::Pose &pose, ScoreFunction const &, EnergyMap &totals) const
 called by the ScoreFunction at the end of energy evaluation. The derived class has the opportunity to accumulate a score into the pose's total_energy EnergyMap. WholeStructure energies operate within this method; any method using a NeighborList during minimization would also operate within this function call.
virtual core::Size version () const
 Return the version of the energy method.
void indicate_required_context_graphs (utility::vector1< bool > &) const
 Indicate in the context-graphs-required list which context-graphs this energy method requires that the Pose maintain when doing neighbor evaluation. Context graphs are allowed.

Constructor & Destructor Documentation

core::scoring::methods::BurialEnergy::BurialEnergy ( ) [inline]

Referenced by clone().


Member Function Documentation

EnergyMethodOP core::scoring::methods::BurialEnergy::clone ( ) const [virtual]
void core::scoring::methods::BurialEnergy::finalize_total_energy ( pose::Pose pose,
ScoreFunction const &  sfxn,
EnergyMap total_energy 
) const [inline, virtual]

called by the ScoreFunction at the end of energy evaluation. The derived class has the opportunity to accumulate a score into the pose's total_energy EnergyMap. WholeStructure energies operate within this method; any method using a NeighborList during minimization would also operate within this function call.

called at the end of energy evaluation

Reimplemented from core::scoring::methods::EnergyMethod.

void core::scoring::methods::BurialEnergy::indicate_required_context_graphs ( utility::vector1< bool > &  context_graphs_required) const [virtual]

Indicate in the context-graphs-required list which context-graphs this energy method requires that the Pose maintain when doing neighbor evaluation. Context graphs are allowed.

Implements core::scoring::methods::EnergyMethod.

References core::scoring::twelve_A_neighbor_graph.

void core::scoring::methods::BurialEnergy::residue_energy ( conformation::Residue const &  rsd,
pose::Pose const &  pose,
EnergyMap emap 
) const [virtual]
void core::scoring::methods::BurialEnergy::setup_for_scoring ( pose::Pose pose,
ScoreFunction const &   
) const [virtual]
core::Size core::scoring::methods::BurialEnergy::version ( ) const [virtual]

Return the version of the energy method.

Implements core::scoring::methods::EnergyMethod.


The documentation for this class was generated from the following files:
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