protocols::pmut_scan::MutationData Class Reference

#include <Mutant.hh>

Collaboration diagram for protocols::pmut_scan::MutationData:

List of all members.

Public Member Functions
	MutationData (char wt_residue, char mut_residue, core::Size pose_resnum, core::Size pdb_resnum, char icode, char chain)
	Constructor for MutationData objects. A mutation holds the wt and mutant amino acid type, pdb resnum, pose resnum, chain and icode.
	~MutationData ()
	Destructor for MutationData objects. No dynamically allocated memory held in MutationData objects so nothing to do here.
std::string	mutation_string () const
	Returns a string representation of this mutation.
std::string	mutation_string_PDB_numbering () const
	Returns a string representation of this mutation using PDB not pose numbering.
char	mut_residue () const
	Accessor for the mut_residue member variable. Needed by the function make_mutant_structure() in the PointMutScanDriver class.
core::Size	pose_resnum () const
	Accessor for the pose_resnum member variable. Needed by the function make_mutant_structure() in the PointMutScanDriver class.
void	print_mutation_data (MutationData &md)
	print function for MutationData class; only used by unit tests
bool	operator== (const MutationData &md_other) const
	function which tests two MutationData objects for equality; only used by unit tests
Friends
class	Mutant
class	PointMutScanDriver
std::ostream &	operator<< (std::ostream &os, const MutationData &md)

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Constructor & Destructor Documentation

protocols::pmut_scan::MutationData::MutationData	(	char	wt_residue,
		char	mut_residue,
		core::Size	pose_resnum,
		core::Size	pdb_resnum,
		char	icode,
		char	chain
	)

Constructor for MutationData objects. A mutation holds the wt and mutant amino acid type, pdb resnum, pose resnum, chain and icode.

MutationData::MutationData

protocols::pmut_scan::MutationData::~MutationData

(

)

Destructor for MutationData objects. No dynamically allocated memory held in MutationData objects so nothing to do here.

MutationData::~MutationData

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Member Function Documentation

char protocols::pmut_scan::MutationData::mut_residue

(

)

const

Accessor for the mut_residue member variable. Needed by the function make_mutant_structure() in the PointMutScanDriver class.

MutationData::mut_residue

std::string protocols::pmut_scan::MutationData::mutation_string

(

)

const

Returns a string representation of this mutation.

MutationData::mutation_string

Referenced by protocols::pmut_scan::PointMutScanDriver::make_specific_mutant().

std::string protocols::pmut_scan::MutationData::mutation_string_PDB_numbering

(

)

const

Returns a string representation of this mutation using PDB not pose numbering.

MutationData::mutation_string_PDB_numbering

Referenced by protocols::pmut_scan::PointMutScanDriver::make_specific_mutant().

bool protocols::pmut_scan::MutationData::operator==

(

const MutationData &

md_other

)

const

function which tests two MutationData objects for equality; only used by unit tests

MutationData::mutation_data_equals

core::Size protocols::pmut_scan::MutationData::pose_resnum

(

)

const

Accessor for the pose_resnum member variable. Needed by the function make_mutant_structure() in the PointMutScanDriver class.

MutationData::pose_resnum

void protocols::pmut_scan::MutationData::print_mutation_data

(

MutationData &

md

)

print function for MutationData class; only used by unit tests

MutationData::print_mutation_data

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Friends And Related Function Documentation

friend class Mutant [friend]

std::ostream& operator<<	(	std::ostream &	os,
		const MutationData &	md
	)		[friend]

friend class PointMutScanDriver [friend]

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The documentation for this class was generated from the following files:

• src/protocols/pmut_scan/Mutant.hh
• src/protocols/pmut_scan/Mutant.cc