Rosetta 3.4
Public Types | Public Member Functions
protocols::simple_filters::ConservedPosMutationFilter Class Reference

#include <ConservedPosMutationFilter.hh>

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List of all members.

Public Types

typedef filters::Filter parent
typedef filters::Filter Filter
typedef filters::FilterOP FilterOP

Public Member Functions

 ConservedPosMutationFilter ()
 ~ConservedPosMutationFilter ()
FilterOP clone () const
FilterOP fresh_instance () const
void parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)
virtual bool apply (core::pose::Pose const &pose) const
 Returns true if the given pose passes the filter, false otherwise. In this case, a pose passes if it less than max_allowed_conserved_pos_mutations_ mutations at conserved position. the decision whether a given position counts as conserved is made by the RestrictConservedLowDdgOperation task operation to prevent duplication of code.
void set_max_allowed_conserved_pos_mutations (core::Size value)
virtual std::string name () const

Member Typedef Documentation


Constructor & Destructor Documentation

protocols::simple_filters::ConservedPosMutationFilter::ConservedPosMutationFilter ( )
protocols::simple_filters::ConservedPosMutationFilter::~ConservedPosMutationFilter ( )

Member Function Documentation

bool protocols::simple_filters::ConservedPosMutationFilter::apply ( core::pose::Pose const &  pose) const [virtual]

Returns true if the given pose passes the filter, false otherwise. In this case, a pose passes if it less than max_allowed_conserved_pos_mutations_ mutations at conserved position. the decision whether a given position counts as conserved is made by the RestrictConservedLowDdgOperation task operation to prevent duplication of code.

Implements protocols::filters::Filter.

References core::chemical::ResidueType::aa(), core::chemical::ResidueType::is_protein(), core::chemical::oneletter_code_from_aa(), core::pose::Pose::residue_type(), core::pose::Pose::total_residue(), and tr().

filters::FilterOP protocols::simple_filters::ConservedPosMutationFilter::clone ( ) const [virtual]
filters::FilterOP protocols::simple_filters::ConservedPosMutationFilter::fresh_instance ( ) const [virtual]
virtual std::string protocols::simple_filters::ConservedPosMutationFilter::name ( ) const [inline, virtual]

Reimplemented from protocols::filters::Filter.

void protocols::simple_filters::ConservedPosMutationFilter::parse_my_tag ( utility::tag::TagPtr const  tag,
protocols::moves::DataMap ,
filters::Filters_map const &  ,
protocols::moves::Movers_map const &  ,
core::pose::Pose const &   
) [virtual]

Reimplemented from protocols::filters::Filter.

void protocols::simple_filters::ConservedPosMutationFilter::set_max_allowed_conserved_pos_mutations ( core::Size  value) [inline]

The documentation for this class was generated from the following files:
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