Rosetta 3.4
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src/protocols/antibody2/Ab_ModelCDRH3.cc File Reference

Build a homology model of an antibody2. More...

#include <protocols/jobdist/JobDistributors.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueSelector.hh>
#include <core/chemical/VariantType.hh>
#include <core/io/pdb/pose_io.hh>
#include <core/io/silent/SilentStruct.hh>
#include <core/io/silent/SilentStructFactory.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/pack/rotamer_set/UnboundRotamersOperation.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/dunbrack/RotamerConstraint.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/util.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/rms_util.tmpl.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/constraints/ConstraintFactory.hh>
#include <core/scoring/constraints/ConstraintIO.hh>
#include <core/import_pose/import_pose.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/antibody.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/prof.hh>
#include <basic/Tracer.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <basic/datacache/DiagnosticData.hh>
#include <protocols/toolbox/task_operations/RestrictToInterface.hh>
#include <protocols/jd2/ScoreMap.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/Job.hh>
#include <protocols/jd2/JobOutputter.hh>
#include <protocols/loops/loops_main.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/simple_moves/ConstraintSetMover.hh>
#include <protocols/simple_moves/MinMover.hh>
#include <protocols/simple_moves/PackRotamersMover.hh>
#include <protocols/simple_moves/RotamerTrialsMover.hh>
#include <protocols/simple_moves/RotamerTrialsMinMover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/moves/PyMolMover.hh>
#include <protocols/rigid/RB_geometry.hh>
#include <protocols/rigid/RigidBodyMover.hh>
#include <protocols/antibody2/Ab_util.hh>
#include <protocols/antibody2/Ab_Info.hh>
#include <protocols/antibody2/Ab_ModelCDRH3.hh>
#include <protocols/antibody2/CDRH3Modeler2.hh>
#include <protocols/antibody2/Ab_LH_RepulsiveRamp_Mover.hh>
#include <protocols/antibody2/Ab_LH_SnugFit_Mover.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>

Namespaces

namespace  protocols
 

The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.


namespace  protocols::antibody2

Functions

static basic::Tracer TR ("protocols.antibody2.Ab_ModelCDRH3")
std::ostream & protocols::antibody2::operator<< (std::ostream &out, const Ab_ModelCDRH3 &ab_m_2)

Detailed Description

Build a homology model of an antibody2.

Detailed:
Author:
Jianqing Xu ( xubest@gmail.com )

Function Documentation

static basic::Tracer TR ( "protocols.antibody2.Ab_ModelCDRH3"  ) [static]
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