core::scoring::rna::RNA_LowResolutionPotential Member List

This is the complete list of members for core::scoring::rna::RNA_LowResolutionPotential, including all inherited members.

check_clear_for_stacking(pose::Pose &pose, Size const &i, int const &sign) const	core::scoring::rna::RNA_LowResolutionPotential
check_forming_base_pair(pose::Pose &pose, Size const &i, Size const &j) const	core::scoring::rna::RNA_LowResolutionPotential
eval_atom_derivative_base_base(id::AtomID const &atom_id, pose::Pose const &pose, scoring::EnergyMap const &weights, Vector &F1, Vector &F2) const	core::scoring::rna::RNA_LowResolutionPotential
eval_atom_derivative_rna_backbone_backbone(id::AtomID const &atom_id, pose::Pose const &pose, Vector &F1, Vector &F2) const	core::scoring::rna::RNA_LowResolutionPotential
eval_atom_derivative_rna_base_backbone(id::AtomID const &atom_id, pose::Pose const &pose, Vector &F1, Vector &F2) const	core::scoring::rna::RNA_LowResolutionPotential
eval_atom_derivative_rna_repulsive(id::AtomID const &atom_id, pose::Pose const &pose, Vector &F1, Vector &F2) const	core::scoring::rna::RNA_LowResolutionPotential
eval_rna_base_pair_energy(rna::RNA_RawBaseBaseInfo &rna_raw_base_base_info, conformation::Residue const &rsd1, conformation::Residue const &rsd2, pose::Pose const &pose, Vector const &centroid1, Vector const &centroid2, core::kinematics::Stub const &stub1, core::kinematics::Stub const &stub2) const	core::scoring::rna::RNA_LowResolutionPotential
finalize(pose::Pose &pose) const	core::scoring::rna::RNA_LowResolutionPotential
get_rna_stack_score(Distance const x, Distance const y, Distance const z, Real &deriv_x=dummy_deriv, Real &deriv_y=dummy_deriv, Real &deriv_z=dummy_deriv) const	core::scoring::rna::RNA_LowResolutionPotential
more_precise_base_pair_classification(bool const &value)	core::scoring::rna::RNA_LowResolutionPotential	[inline]
rna_backbone_backbone_pair_energy(conformation::Residue const &rsd1, conformation::Residue const &rsd2) const	core::scoring::rna::RNA_LowResolutionPotential
rna_base_backbone_pair_energy(conformation::Residue const &rsd1, conformation::Residue const &rsd2, Vector const &centroid1, Vector const &centroid2, core::kinematics::Stub const &stub1, core::kinematics::Stub const &stub2) const	core::scoring::rna::RNA_LowResolutionPotential
RNA_LowResolutionPotential()	core::scoring::rna::RNA_LowResolutionPotential
rna_repulsive_pair_energy(conformation::Residue const &rsd1, conformation::Residue const &rsd2) const	core::scoring::rna::RNA_LowResolutionPotential
update_rna_base_base_interactions(pose::Pose &pose) const	core::scoring::rna::RNA_LowResolutionPotential
update_rna_base_pair_list(pose::Pose &pose) const	core::scoring::rna::RNA_LowResolutionPotential
update_rna_centroid_info(pose::Pose &pose) const	core::scoring::rna::RNA_LowResolutionPotential