Rosetta 3.4
Public Types | Public Member Functions
protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter Class Reference

#include <ParallelBetaPairingPreferenceFilter.hh>

Inheritance diagram for protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter:
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Collaboration diagram for protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter:
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List of all members.

Public Types

typedef protocols::filters::Filter Super
typedef core::Size Size
typedef core::Real Real
typedef core::chemical::AA AA
typedef protocols::filters::Filter Filter
typedef std::string String
typedef
protocols::filters::FilterOP 
FilterOP
typedef core::pose::Pose Pose
typedef utility::tag::TagPtr TagPtr
typedef
protocols::filters::Filters_map 
Filters_map
typedef protocols::moves::DataMap DataMap
typedef
protocols::moves::Movers_map 
Movers_map

Public Member Functions

 ParallelBetaPairingPreferenceFilter ()
 ParallelBetaPairingPreferenceFilter (ParallelBetaPairingPreferenceFilter const &rval)
virtual ~ParallelBetaPairingPreferenceFilter ()
virtual FilterOP clone () const
virtual FilterOP fresh_instance () const
void filter_value (Real const value)
Real compute (Pose const &pose) const
 compute number of contacts
Real score_pairmatrix (AA aa1, AA aa2) const
 refer score of residue pair
virtual Real report_sm (Pose const &pose) const
 used to report score
virtual void report (std::ostream &out, Pose const &pose) const
 used to report score
virtual bool apply (Pose const &pose) const
 Returns true if the given pose passes the filter, false otherwise.
virtual void parse_my_tag (TagPtr const tag, DataMap &, Filters_map const &, Movers_map const &, Pose const &)
 parse xml

Member Typedef Documentation


Constructor & Destructor Documentation

protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::ParallelBetaPairingPreferenceFilter ( )
protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::ParallelBetaPairingPreferenceFilter ( ParallelBetaPairingPreferenceFilter const &  rval)
virtual protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::~ParallelBetaPairingPreferenceFilter ( ) [inline, virtual]

Member Function Documentation

bool protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::apply ( Pose const &  pose) const [virtual]

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References compute().

virtual FilterOP protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::clone ( ) const [inline, virtual]
ParallelBetaPairingPreferenceFilter::Real protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::compute ( Pose const &  pose) const
void protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::filter_value ( Real const  value)

Referenced by parse_my_tag().

virtual FilterOP protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::fresh_instance ( ) const [inline, virtual]
void protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::parse_my_tag ( TagPtr const  tag,
DataMap ,
Filters_map const &  ,
Movers_map const &  ,
Pose const &   
) [virtual]

parse xml

Reimplemented from protocols::filters::Filter.

References filter_value().

void protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::report ( std::ostream &  out,
Pose const &  pose 
) const [virtual]

used to report score

report filter results

Reimplemented from protocols::filters::Filter.

References compute().

ParallelBetaPairingPreferenceFilter::Real protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::report_sm ( Pose const &  pose) const [virtual]

used to report score

return filter value

Reimplemented from protocols::filters::Filter.

References compute().

ParallelBetaPairingPreferenceFilter::Real protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter::score_pairmatrix ( AA  aa1,
AA  aa2 
) const

refer score of residue pair

Referenced by compute().


The documentation for this class was generated from the following files:
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