Rosetta 3.4
Public Member Functions | Static Public Member Functions
protocols::topology_broker::CutBiasClaimer Class Reference

#include <CutBiasClaimer.hh>

Inheritance diagram for protocols::topology_broker::CutBiasClaimer:
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Collaboration diagram for protocols::topology_broker::CutBiasClaimer:
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List of all members.

Public Member Functions

 CutBiasClaimer ()
 CutBiasClaimer (utility::vector1< core::Real > const &)
 CutBiasClaimer (core::fragment::SecondaryStructure const &ss_def)
virtual TopologyClaimerOP clone () const
 clone it!
virtual void generate_claims (DofClaims &)
 generate first round of DOF claims
virtual void read (std::istream &)
 read definition of Claimer from setup file, i.e., a CLAIMER <type> ... END_CLAIMER block
virtual std::string type () const
 type() is specifying the output name of the TopologyClaimer
virtual void manipulate_cut_bias (utility::vector1< core::Real > &)
 multiply your bias to this -- if its zero don't change that, i.e., multiply only this is used during fold-tree generation to set the cut-points. it starts with 1.0 for all residues. Fragments can add their loop-fraction

Static Public Member Functions

static std::string _static_type_name ()

Constructor & Destructor Documentation

protocols::topology_broker::CutBiasClaimer::CutBiasClaimer ( )

Referenced by clone().

protocols::topology_broker::CutBiasClaimer::CutBiasClaimer ( utility::vector1< core::Real > const &  set)
protocols::topology_broker::CutBiasClaimer::CutBiasClaimer ( core::fragment::SecondaryStructure const &  ss_def)

Member Function Documentation

static std::string protocols::topology_broker::CutBiasClaimer::_static_type_name ( ) [inline, static]

Referenced by type().

virtual TopologyClaimerOP protocols::topology_broker::CutBiasClaimer::clone ( ) const [inline, virtual]
virtual void protocols::topology_broker::CutBiasClaimer::generate_claims ( DofClaims ) [inline, virtual]

generate first round of DOF claims

Reimplemented from protocols::topology_broker::TopologyClaimer.

void protocols::topology_broker::CutBiasClaimer::manipulate_cut_bias ( utility::vector1< core::Real > &  ) [virtual]

multiply your bias to this -- if its zero don't change that, i.e., multiply only this is used during fold-tree generation to set the cut-points. it starts with 1.0 for all residues. Fragments can add their loop-fraction

Reimplemented from protocols::topology_broker::TopologyClaimer.

virtual void protocols::topology_broker::CutBiasClaimer::read ( std::istream &  ) [inline, virtual]

read definition of Claimer from setup file, i.e., a CLAIMER <type> ... END_CLAIMER block

Reimplemented from protocols::topology_broker::TopologyClaimer.

virtual std::string protocols::topology_broker::CutBiasClaimer::type ( ) const [inline, virtual]

type() is specifying the output name of the TopologyClaimer

Implements protocols::topology_broker::TopologyClaimer.

References _static_type_name().


The documentation for this class was generated from the following files:
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